Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CDKL2Q92772 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.09■□□□□ 0.65
CDKL2Q92772 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.09■□□□□ 0.65
CDKL2Q92772 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.09■□□□□ 0.65
CDKL2Q92772 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.09■□□□□ 0.65
CDKL2Q92772 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 AC142086.2-201ENST00000569753 217 ntBASIC19.09■□□□□ 0.65
CDKL2Q92772 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKL2Q92772 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.09■□□□□ 0.65
CDKL2Q92772 HLA-A-209ENST00000638375 975 ntBASIC19.09■□□□□ 0.65
CDKL2Q92772 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 AL390961.4-201ENST00000623958 2535 ntBASIC19.09■□□□□ 0.65
CDKL2Q92772 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.09■□□□□ 0.65
CDKL2Q92772 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL2Q92772 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL2Q92772 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDKL2Q92772 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL2Q92772 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.08■□□□□ 0.65
CDKL2Q92772 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL2Q92772 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.08■□□□□ 0.65
CDKL2Q92772 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL2Q92772 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDKL2Q92772 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CDKL2Q92772 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.08■□□□□ 0.64
CDKL2Q92772 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.08■□□□□ 0.64
CDKL2Q92772 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.08■□□□□ 0.64
CDKL2Q92772 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.08■□□□□ 0.64
CDKL2Q92772 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.08■□□□□ 0.64
CDKL2Q92772 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDKL2Q92772 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.08■□□□□ 0.64
CDKL2Q92772 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CDKL2Q92772 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.08■□□□□ 0.64
CDKL2Q92772 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.08■□□□□ 0.64
CDKL2Q92772 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL2Q92772 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.08■□□□□ 0.64
CDKL2Q92772 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.07■□□□□ 0.64
CDKL2Q92772 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDKL2Q92772 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.07■□□□□ 0.64
CDKL2Q92772 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.07■□□□□ 0.64
CDKL2Q92772 TSPY23P-201ENST00000440136 739 ntBASIC19.07■□□□□ 0.64
CDKL2Q92772 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.07■□□□□ 0.64
CDKL2Q92772 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL2Q92772 UNC93B5-201ENST00000530315 699 ntBASIC19.07■□□□□ 0.64
CDKL2Q92772 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDKL2Q92772 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL2Q92772 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDKL2Q92772 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.07■□□□□ 0.64
CDKL2Q92772 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL2Q92772 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.07■□□□□ 0.64
CDKL2Q92772 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.07■□□□□ 0.64
CDKL2Q92772 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDKL2Q92772 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 AC007613.1-201ENST00000572811 2597 ntBASIC19.07■□□□□ 0.64
CDKL2Q92772 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.07■□□□□ 0.64
CDKL2Q92772 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL2Q92772 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL2Q92772 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL2Q92772 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL2Q92772 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL2Q92772 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CDKL2Q92772 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDKL2Q92772 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL2Q92772 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL2Q92772 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDKL2Q92772 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDKL2Q92772 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL2Q92772 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL2Q92772 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL2Q92772 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.06■□□□□ 0.64
CDKL2Q92772 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms