Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RPS4Y2Q8TD47 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 AC069152.1-201ENST00000438030 544 ntBASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 C1QL1P1-201ENST00000568105 661 ntBASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 KRT8P41-201ENST00000533985 1514 ntBASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4Y2Q8TD47 AC067852.2-201ENST00000590513 2313 ntBASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4Y2Q8TD47 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms