Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM11BQ8TCY0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 AC084018.2-201ENST00000613093 2607 ntBASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 AC012317.2-201ENST00000623305 2251 ntBASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 AC019069.1-201ENST00000610008 1333 ntBASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 FEM1AP3-201ENST00000403722 1741 ntBASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM11BQ8TCY0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SMIM11BQ8TCY0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM11BQ8TCY0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms