Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 HOMER2P1-201ENST00000455653 964 ntBASIC21.38■■□□□ 1.01
RETREG2Q8NC44 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 AC004408.2-201ENST00000623613 2777 ntBASIC21.38■■□□□ 1.01
RETREG2Q8NC44 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG2Q8NC44 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 PCED1CP-201ENST00000419887 785 ntBASIC21.37■■□□□ 1.01
RETREG2Q8NC44 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 AL121956.5-201ENST00000625261 221 ntBASIC21.37■■□□□ 1.01
RETREG2Q8NC44 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG2Q8NC44 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 AC009947.2-201ENST00000444014 672 ntBASIC21.36■■□□□ 1.01
RETREG2Q8NC44 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
RETREG2Q8NC44 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms