Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SIX5Q8N196 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.31■□□□□ 0.68
SIX5Q8N196 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SIX5Q8N196 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.31■□□□□ 0.68
SIX5Q8N196 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 MIR662-201ENST00000384847 95 ntBASIC19.31■□□□□ 0.68
SIX5Q8N196 SEC1P-202ENST00000473944 940 ntBASIC19.31■□□□□ 0.68
SIX5Q8N196 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.31■□□□□ 0.68
SIX5Q8N196 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.31■□□□□ 0.68
SIX5Q8N196 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.31■□□□□ 0.68
SIX5Q8N196 AC138894.3-201ENST00000603787 634 ntBASIC19.31■□□□□ 0.68
SIX5Q8N196 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SIX5Q8N196 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SIX5Q8N196 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.31■□□□□ 0.68
SIX5Q8N196 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX5Q8N196 AL391807.1-203ENST00000604392 2365 ntBASIC19.3■□□□□ 0.68
SIX5Q8N196 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SIX5Q8N196 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.3■□□□□ 0.68
SIX5Q8N196 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.3■□□□□ 0.68
SIX5Q8N196 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SIX5Q8N196 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.3■□□□□ 0.68
SIX5Q8N196 AC104819.1-201ENST00000504587 486 ntBASIC19.3■□□□□ 0.68
SIX5Q8N196 RNF126P1-202ENST00000569893 925 ntBASIC19.3■□□□□ 0.68
SIX5Q8N196 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.3■□□□□ 0.68
SIX5Q8N196 AL671883.3-201ENST00000603274 991 ntBASIC19.3■□□□□ 0.68
SIX5Q8N196 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SIX5Q8N196 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SIX5Q8N196 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SIX5Q8N196 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIX5Q8N196 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 HLA-A-201ENST00000376802 1334 ntBASIC19.29■□□□□ 0.68
SIX5Q8N196 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SIX5Q8N196 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SIX5Q8N196 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SIX5Q8N196 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.29■□□□□ 0.68
SIX5Q8N196 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.29■□□□□ 0.68
SIX5Q8N196 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.29■□□□□ 0.68
SIX5Q8N196 AL023284.2-201ENST00000405850 579 ntBASIC19.29■□□□□ 0.68
SIX5Q8N196 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.29■□□□□ 0.68
SIX5Q8N196 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.29■□□□□ 0.68
SIX5Q8N196 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.29■□□□□ 0.68
SIX5Q8N196 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.29■□□□□ 0.68
SIX5Q8N196 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SIX5Q8N196 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.29■□□□□ 0.68
SIX5Q8N196 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIX5Q8N196 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.28■□□□□ 0.68
SIX5Q8N196 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.28■□□□□ 0.68
SIX5Q8N196 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.28■□□□□ 0.68
SIX5Q8N196 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.28■□□□□ 0.68
SIX5Q8N196 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.28■□□□□ 0.68
SIX5Q8N196 AL590627.1-203ENST00000421194 1026 ntBASIC19.28■□□□□ 0.68
SIX5Q8N196 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.28■□□□□ 0.68
SIX5Q8N196 KRT16P4-201ENST00000453883 522 ntBASIC19.28■□□□□ 0.68
SIX5Q8N196 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.28■□□□□ 0.68
SIX5Q8N196 BX640515.1-201ENST00000617215 977 ntBASIC19.28■□□□□ 0.68
SIX5Q8N196 AC117500.6-201ENST00000624871 588 ntBASIC19.28■□□□□ 0.68
SIX5Q8N196 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIX5Q8N196 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.28■□□□□ 0.68
SIX5Q8N196 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SIX5Q8N196 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms