Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 KRT126P-201ENST00000549467 1181 ntBASIC16.68■□□□□ 0.26
RTTNQ86VV8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 C2orf69P3-201ENST00000565542 1120 ntBASIC16.68■□□□□ 0.26
RTTNQ86VV8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.67■□□□□ 0.26
RTTNQ86VV8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.67■□□□□ 0.26
RTTNQ86VV8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTTNQ86VV8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 FAM197Y1-201ENST00000421178 764 ntBASIC16.66■□□□□ 0.26
RTTNQ86VV8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 CR392000.1-201ENST00000624770 1228 ntBASIC16.66■□□□□ 0.26
RTTNQ86VV8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 AL390955.1-201ENST00000428694 934 ntBASIC16.66■□□□□ 0.26
RTTNQ86VV8 AC091390.4-202ENST00000476426 537 ntBASIC16.66■□□□□ 0.26
RTTNQ86VV8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.66■□□□□ 0.26
RTTNQ86VV8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTTNQ86VV8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 AC113347.1-201ENST00000413321 391 ntBASIC16.65■□□□□ 0.26
RTTNQ86VV8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTTNQ86VV8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTTNQ86VV8 TSPY23P-201ENST00000440136 739 ntBASIC16.65■□□□□ 0.26
RTTNQ86VV8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms