Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.74■□□□□ 0.439e-6■■□□□ 12.1
SND1Q7KZF4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.429e-6■■□□□ 12.1
SND1Q7KZF4 SNX1-203ENST00000558040 774 ntTSL 517.6■□□□□ 0.419e-6■■□□□ 12.1
SND1Q7KZF4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.49e-6■■□□□ 12.1
SND1Q7KZF4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.34■□□□□ 0.379e-6■■□□□ 12.1
SND1Q7KZF4 AIFM1-204ENST00000416073 2248 ntTSL 1 (best)17.09■□□□□ 0.339e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.97■□□□□ 0.312e-10■■□□□ 12.1
SND1Q7KZF4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.289e-6■■□□□ 12.1
SND1Q7KZF4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.8■□□□□ 0.289e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-211ENST00000476181 660 ntTSL 1 (best)16.5■□□□□ 0.232e-10■■□□□ 12.1
SND1Q7KZF4 NDUFB2-205ENST00000464564 469 ntTSL 516.26■□□□□ 0.192e-10■■□□□ 12.1
SND1Q7KZF4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.03■□□□□ 0.169e-6■■□□□ 12.1
SND1Q7KZF4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.139e-6■■□□□ 12.1
SND1Q7KZF4 PDHA1-201ENST00000355808 699 ntTSL 315.86■□□□□ 0.139e-6■■□□□ 12.1
SND1Q7KZF4 DNTTIP2-203ENST00000460191 3084 ntTSL 215.75■□□□□ 0.119e-6■■□□□ 12.1
SND1Q7KZF4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.28■□□□□ 0.049e-6■■□□□ 12.1
SND1Q7KZF4 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC15.2■□□□□ 0.029e-6■■□□□ 12.1
SND1Q7KZF4 PDHB-207ENST00000479945 4459 ntTSL 215.18■□□□□ 0.029e-6■■□□□ 12.1
SND1Q7KZF4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.07■□□□□ 09e-6■■□□□ 12.1
SND1Q7KZF4 CYB561A3-205ENST00000535177 1026 ntTSL 1 (best)14.88□□□□□ -0.032e-10■■□□□ 12.1
SND1Q7KZF4 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC14.6□□□□□ -0.079e-6■■□□□ 12.1
SND1Q7KZF4 PDHB-202ENST00000383714 1478 ntTSL 1 (best)14.52□□□□□ -0.089e-6■■□□□ 12.1
SND1Q7KZF4 PDHB-204ENST00000469364 1616 ntTSL 514.4□□□□□ -0.19e-6■■□□□ 12.1
SND1Q7KZF4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.32□□□□□ -0.129e-6■■□□□ 12.1
SND1Q7KZF4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.159e-6■■□□□ 12.1
SND1Q7KZF4 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.169e-6■■□□□ 12.1
SND1Q7KZF4 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.169e-6■■□□□ 12.1
SND1Q7KZF4 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.179e-6■■□□□ 12.1
SND1Q7KZF4 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.85□□□□□ -0.199e-6■■□□□ 12.1
SND1Q7KZF4 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.219e-6■■□□□ 12.1
SND1Q7KZF4 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC13.57□□□□□ -0.249e-6■■□□□ 12.1
SND1Q7KZF4 PDHA1-211ENST00000492364 611 ntTSL 213.56□□□□□ -0.249e-6■■□□□ 12.1
SND1Q7KZF4 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.36□□□□□ -0.279e-6■■□□□ 12.1
SND1Q7KZF4 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.289e-6■■□□□ 12.1
SND1Q7KZF4 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.299e-6■■□□□ 12.1
SND1Q7KZF4 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.49e-6■■□□□ 12.1
SND1Q7KZF4 TRAFD1-205ENST00000548277 560 ntTSL 212.37□□□□□ -0.439e-6■■□□□ 12.1
SND1Q7KZF4 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC12.3□□□□□ -0.449e-6■■□□□ 12.1
SND1Q7KZF4 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC12.29□□□□□ -0.449e-6■■□□□ 12.1
SND1Q7KZF4 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC12.04□□□□□ -0.489e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-206ENST00000464566 726 ntTSL 311.71□□□□□ -0.532e-10■■□□□ 12.1
SND1Q7KZF4 SNX1-212ENST00000560861 850 ntTSL 311.7□□□□□ -0.549e-6■■□□□ 12.1
SND1Q7KZF4 CYB561A3-212ENST00000539128 779 ntTSL 311.61□□□□□ -0.552e-10■■□□□ 12.1
SND1Q7KZF4 CYB561A3-211ENST00000538263 615 ntTSL 411.41□□□□□ -0.582e-10■■□□□ 12.1
SND1Q7KZF4 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC11.35□□□□□ -0.599e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC11.01□□□□□ -0.652e-10■■□□□ 12.1
SND1Q7KZF4 ABCE1-207ENST00000507193 2146 ntTSL 1 (best)10.91□□□□□ -0.669e-6■■□□□ 12.1
SND1Q7KZF4 TRAFD1-208ENST00000552890 1043 ntTSL 210.76□□□□□ -0.699e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC10.76□□□□□ -0.699e-6■■□□□ 12.1
SND1Q7KZF4 SNX1-202ENST00000380285 8119 ntTSL 1 (best)10.62□□□□□ -0.719e-6■■□□□ 12.1
SND1Q7KZF4 TIMM10-203ENST00000525587 486 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.729e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.749e-6■■□□□ 12.1
SND1Q7KZF4 AIFM1-206ENST00000527892 2105 ntTSL 210.39□□□□□ -0.759e-6■■□□□ 12.1
SND1Q7KZF4 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.769e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-214ENST00000479181 665 ntTSL 29.86□□□□□ -0.832e-10■■□□□ 12.1
SND1Q7KZF4 ABCE1-206ENST00000506506 421 ntTSL 39.72□□□□□ -0.859e-6■■□□□ 12.1
SND1Q7KZF4 ABCE1-204ENST00000504292 625 ntTSL 39.71□□□□□ -0.869e-6■■□□□ 12.1
SND1Q7KZF4 C12orf57-207ENST00000545581 556 ntTSL 39.62□□□□□ -0.879e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC9.59□□□□□ -0.879e-6■■□□□ 12.1
SND1Q7KZF4 DNTTIP2-206ENST00000496672 811 ntTSL 1 (best)9.52□□□□□ -0.899e-6■■□□□ 12.1
SND1Q7KZF4 C12orf57-205ENST00000542222 640 ntTSL 29.46□□□□□ -0.99e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC9.38□□□□□ -0.919e-6■■□□□ 12.1
SND1Q7KZF4 ABCE1-203ENST00000502803 782 ntTSL 59.09□□□□□ -0.959e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-203ENST00000413740 342 ntTSL 1 (best)8.83□□□□□ -19e-6■■□□□ 12.1
SND1Q7KZF4 CYB561A3-209ENST00000537364 4094 ntTSL 28.63□□□□□ -1.032e-10■■□□□ 12.1
SND1Q7KZF4 DNTTIP2-207ENST00000528680 499 ntTSL 38.33□□□□□ -1.089e-6■■□□□ 12.1
SND1Q7KZF4 DNTTIP2-201ENST00000359208 2199 ntTSL 28.22□□□□□ -1.099e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-213ENST00000456676 2230 ntTSL 1 (best)8.22□□□□□ -1.099e-6■■□□□ 12.1
SND1Q7KZF4 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.03□□□□□ -1.129e-6■■□□□ 12.1
SND1Q7KZF4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.94□□□□□ -1.149e-6■■□□□ 12.1
SND1Q7KZF4 RHOBTB3-210ENST00000510313 990 ntTSL 27.53□□□□□ -1.29e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.47□□□□□ -1.212e-10■■□□□ 12.1
SND1Q7KZF4 RHOBTB3-208ENST00000507186 492 ntTSL 37.1□□□□□ -1.279e-6■■□□□ 12.1
SND1Q7KZF4 SRD5A3-202ENST00000505210 768 ntTSL 37.06□□□□□ -1.289e-6■■□□□ 12.1
SND1Q7KZF4 HBP1-204ENST00000463790 433 ntTSL 56.97□□□□□ -1.299e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.56□□□□□ -1.369e-6■■□□□ 12.1
SND1Q7KZF4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.429e-6■■□□□ 12.1
SND1Q7KZF4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.549e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.36□□□□□ -1.552e-10■■□□□ 12.1
SND1Q7KZF4 WDR12-208ENST00000478869 541 ntTSL 25.31□□□□□ -1.569e-6■■□□□ 12.1
SND1Q7KZF4 SRD5A3-203ENST00000514398 715 ntTSL 35.05□□□□□ -1.69e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.62□□□□□ -1.679e-6■■□□□ 12.1
SND1Q7KZF4 MLH1-210ENST00000450420 233 ntTSL 1 (best)4.32□□□□□ -1.729e-6■■□□□ 12.1
SND1Q7KZF4 SDF4-206ENST00000478938 2591 ntTSL 223.98■■□□□ 1.431e-7■■□□□ 12.1
SND1Q7KZF4 SDF4-207ENST00000494748 3516 ntTSL 217.17■□□□□ 0.341e-7■■□□□ 12.1
SND1Q7KZF4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.633e-12■■□□□ 12.1
SND1Q7KZF4 FKBP10-206ENST00000489591 2826 ntTSL 218.51■□□□□ 0.553e-12■■□□□ 12.1
SND1Q7KZF4 FLNA-217ENST00000498411 368 ntTSL 315.89■□□□□ 0.132e-6■■□□□ 12.1
SND1Q7KZF4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.144e-7■■□□□ 12.1
SND1Q7KZF4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.24e-7■■□□□ 12.1
SND1Q7KZF4 F2-203ENST00000469189 610 ntTSL 218.68■□□□□ 0.585e-42■■□□□ 12.1
SND1Q7KZF4 CP-214ENST00000497797 606 ntTSL 28.37□□□□□ -1.071e-23■■□□□ 12.1
SND1Q7KZF4 CP-206ENST00000471356 671 ntTSL 26.54□□□□□ -1.361e-23■■□□□ 12.1
SND1Q7KZF4 P4HB-204ENST00000466567 872 ntTSL 221.62■■□□□ 1.051e-24■■□□□ 12.1
SND1Q7KZF4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-8■■□□□ 12.1
SND1Q7KZF4 S100A11-202ENST00000478109 557 ntTSL 36.51□□□□□ -1.372e-8■■□□□ 12.1
SND1Q7KZF4 IMPDH2-212ENST00000496837 760 ntTSL 215.49■□□□□ 0.076e-8■■□□□ 12.1
SND1Q7KZF4 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.082e-12■■□□□ 12.1
SND1Q7KZF4 IMPDH2-210ENST00000485500 852 ntTSL 311.61□□□□□ -0.556e-8■■□□□ 12.1
SND1Q7KZF4 IMPDH2-203ENST00000442157 865 ntTSL 210.02□□□□□ -0.816e-8■■□□□ 12.1
Retrieved 100 of 13,567 protein–RNA pairs in 80.1 ms