Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 AC092368.3-202ENST00000574180 1591 ntBASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P1Q5VSP4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 AC068880.1-201ENST00000507289 2297 ntBASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 CDCA4P2-201ENST00000441182 718 ntBASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 AC091874.3-201ENST00000512672 1195 ntBASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 AL354751.1-201ENST00000412768 1863 ntBASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P1Q5VSP4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P1Q5VSP4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 AL121832.2-201ENST00000610979 668 ntBASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 AC083906.6-201ENST00000641366 219 ntBASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 BICD1-207ENST00000551848 1962 ntBASIC17.08■□□□□ 0.32
LCN1P1Q5VSP4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 SLC29A4P1-201ENST00000398760 971 ntBASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 HLA-B-256ENST00000639848 1089 ntBASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.07■□□□□ 0.32
LCN1P1Q5VSP4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms