Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.33■□□□□ 0.52
RIF1Q5UIP0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIF1Q5UIP0 IGHV3-41-201ENST00000613121 348 ntBASIC18.33■□□□□ 0.52
RIF1Q5UIP0 TREX1-205ENST00000625293 1783 ntBASIC18.33■□□□□ 0.52
RIF1Q5UIP0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIF1Q5UIP0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RIF1Q5UIP0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIF1Q5UIP0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIF1Q5UIP0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 AC114341.1-201ENST00000618070 349 ntBASIC18.32■□□□□ 0.52
RIF1Q5UIP0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 MCCD1P2-201ENST00000423228 335 ntBASIC18.32■□□□□ 0.52
RIF1Q5UIP0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RIF1Q5UIP0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 RN7SL606P-201ENST00000472779 293 ntBASIC18.31■□□□□ 0.52
RIF1Q5UIP0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 AC096582.2-201ENST00000510860 516 ntBASIC18.31■□□□□ 0.52
RIF1Q5UIP0 GUSBP12-201ENST00000513727 720 ntBASIC18.31■□□□□ 0.52
RIF1Q5UIP0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 AC012645.4-201ENST00000610691 1061 ntBASIC18.31■□□□□ 0.52
RIF1Q5UIP0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.31■□□□□ 0.52
RIF1Q5UIP0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 AC106028.4-201ENST00000614509 607 ntBASIC18.3■□□□□ 0.52
RIF1Q5UIP0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 AC012640.2-201ENST00000561606 901 ntBASIC18.3■□□□□ 0.52
RIF1Q5UIP0 MIR3180-5-201ENST00000583743 153 ntBASIC18.3■□□□□ 0.52
RIF1Q5UIP0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RIF1Q5UIP0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.29■□□□□ 0.52
RIF1Q5UIP0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 AC190387.1-201ENST00000551683 408 ntBASIC18.29■□□□□ 0.52
RIF1Q5UIP0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 GPR32P1-201ENST00000601788 811 ntBASIC18.29■□□□□ 0.52
RIF1Q5UIP0 Z83851.2-201ENST00000609564 659 ntBASIC18.29■□□□□ 0.52
RIF1Q5UIP0 AC008735.5-201ENST00000623544 497 ntBASIC18.29■□□□□ 0.52
RIF1Q5UIP0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIF1Q5UIP0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RIF1Q5UIP0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RIF1Q5UIP0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms