Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 HEIH-201ENST00000623091 1652 ntBASIC16.6■□□□□ 0.25
FREM1Q5H8C1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 AC099343.3-201ENST00000605834 2503 ntBASIC16.6■□□□□ 0.25
FREM1Q5H8C1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 AL137013.1-201ENST00000432946 1228 ntBASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM1Q5H8C1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 AC116407.4-201ENST00000623319 1061 ntBASIC16.59■□□□□ 0.25
FREM1Q5H8C1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FREM1Q5H8C1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 MYC-208ENST00000641036 567 ntBASIC16.58■□□□□ 0.25
FREM1Q5H8C1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM1Q5H8C1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.58■□□□□ 0.24
FREM1Q5H8C1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 AL441883.1-201ENST00000566170 1045 ntBASIC16.58■□□□□ 0.24
FREM1Q5H8C1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM1Q5H8C1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms