Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 Z85996.1-201ENST00000494644 937 ntBASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 AC026471.5-201ENST00000615068 467 ntBASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 MESTP1-201ENST00000404287 994 ntBASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 NUDT16P1-203ENST00000513809 620 ntBASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 SDHAP1-207ENST00000440850 2000 ntBASIC19.12■□□□□ 0.65
KHDC1Q4VXA5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 AP003071.4-201ENST00000562276 1284 ntBASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KHDC1Q4VXA5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 AC011506.1-201ENST00000474329 610 ntBASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 AL160286.2-201ENST00000567150 934 ntBASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 REXO1L10P-201ENST00000615707 1290 ntBASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 REXO1L12P-201ENST00000622156 912 ntBASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KHDC1Q4VXA5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KHDC1Q4VXA5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
KHDC1Q4VXA5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KHDC1Q4VXA5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.09■□□□□ 0.65
KHDC1Q4VXA5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.09■□□□□ 0.65
KHDC1Q4VXA5 AC008040.2-201ENST00000461049 708 ntBASIC19.09■□□□□ 0.65
KHDC1Q4VXA5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms