Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
H3F3AP84243 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 CYP2D8P-201ENST00000433633 1490 ntBASIC16.9■□□□□ 0.3
H3F3AP84243 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.9■□□□□ 0.3
H3F3AP84243 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
H3F3AP84243 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.89■□□□□ 0.3
H3F3AP84243 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.89■□□□□ 0.3
H3F3AP84243 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.89■□□□□ 0.29
H3F3AP84243 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
H3F3AP84243 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.89■□□□□ 0.29
H3F3AP84243 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.89■□□□□ 0.29
H3F3AP84243 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
H3F3AP84243 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.89■□□□□ 0.29
H3F3AP84243 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.89■□□□□ 0.29
H3F3AP84243 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.89■□□□□ 0.29
H3F3AP84243 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
H3F3AP84243 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
H3F3AP84243 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 AC010947.1-201ENST00000623454 693 ntBASIC16.89■□□□□ 0.29
H3F3AP84243 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.89■□□□□ 0.29
H3F3AP84243 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
H3F3AP84243 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3AP84243 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
H3F3AP84243 AC092338.2-201ENST00000568827 1415 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.88■□□□□ 0.29
H3F3AP84243 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 KRT8P32-201ENST00000512863 1461 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
H3F3AP84243 AL512353.2-201ENST00000448759 1962 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.88■□□□□ 0.29
H3F3AP84243 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 TSPY17P-201ENST00000450329 467 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 EGLN1P1-201ENST00000531623 762 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.88■□□□□ 0.29
H3F3AP84243 C2orf69P3-201ENST00000565542 1120 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 AL353719.1-201ENST00000566847 864 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.88■□□□□ 0.29
H3F3AP84243 AC008622.2-201ENST00000617006 1229 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 AC098818.2-201ENST00000564925 2320 ntBASIC16.88■□□□□ 0.29
H3F3AP84243 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
H3F3AP84243 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3AP84243 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
H3F3AP84243 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.88■□□□□ 0.29
H3F3AP84243 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.87■□□□□ 0.29
H3F3AP84243 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3AP84243 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.87■□□□□ 0.29
H3F3AP84243 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3AP84243 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
H3F3AP84243 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3AP84243 CCR12P-201ENST00000446203 998 ntBASIC16.87■□□□□ 0.29
H3F3AP84243 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 NAPSB-206ENST00000562112 1266 ntBASIC16.87■□□□□ 0.29
H3F3AP84243 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.87■□□□□ 0.29
H3F3AP84243 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
H3F3AP84243 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3AP84243 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.87■□□□□ 0.29
H3F3AP84243 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
H3F3AP84243 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3AP84243 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.86■□□□□ 0.29
H3F3AP84243 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
H3F3AP84243 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.86■□□□□ 0.29
H3F3AP84243 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
H3F3AP84243 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms