Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX1P83916 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CBX1P83916 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.8■□□□□ 0.76
CBX1P83916 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX1P83916 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CBX1P83916 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CBX1P83916 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CBX1P83916 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CBX1P83916 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.8■□□□□ 0.76
CBX1P83916 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 AC006455.2-201ENST00000429931 906 ntBASIC19.8■□□□□ 0.76
CBX1P83916 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX1P83916 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 IRX1P1-201ENST00000438849 1838 ntBASIC19.8■□□□□ 0.76
CBX1P83916 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.8■□□□□ 0.76
CBX1P83916 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.8■□□□□ 0.76
CBX1P83916 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX1P83916 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CBX1P83916 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CBX1P83916 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.79■□□□□ 0.76
CBX1P83916 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CBX1P83916 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.79■□□□□ 0.76
CBX1P83916 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.79■□□□□ 0.76
CBX1P83916 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CBX1P83916 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 AP001094.4-201ENST00000579008 2176 ntBASIC19.79■□□□□ 0.76
CBX1P83916 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.79■□□□□ 0.76
CBX1P83916 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.79■□□□□ 0.76
CBX1P83916 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.79■□□□□ 0.76
CBX1P83916 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.79■□□□□ 0.76
CBX1P83916 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CBX1P83916 LINC01126-201ENST00000623515 1646 ntBASIC19.79■□□□□ 0.76
CBX1P83916 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX1P83916 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.79■□□□□ 0.76
CBX1P83916 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.78■□□□□ 0.76
CBX1P83916 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 KRT8P33-201ENST00000508125 1423 ntBASIC19.78■□□□□ 0.76
CBX1P83916 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.78■□□□□ 0.76
CBX1P83916 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CBX1P83916 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CBX1P83916 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.78■□□□□ 0.76
CBX1P83916 YBX1P4-201ENST00000392794 808 ntBASIC19.78■□□□□ 0.76
CBX1P83916 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX1P83916 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.78■□□□□ 0.76
CBX1P83916 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.77■□□□□ 0.76
CBX1P83916 DOC2GP-204ENST00000639052 2548 ntBASIC19.77■□□□□ 0.76
CBX1P83916 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX1P83916 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CBX1P83916 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CBX1P83916 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.77■□□□□ 0.76
CBX1P83916 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.77■□□□□ 0.76
CBX1P83916 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CBX1P83916 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms