Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN2P57739 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN2P57739 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN2P57739 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN2P57739 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN2P57739 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN2P57739 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN2P57739 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN2P57739 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
CLDN2P57739 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN2P57739 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN2P57739 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN2P57739 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN2P57739 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN2P57739 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN2P57739 ZNF444P1-201ENST00000559497 298 ntBASIC18.65■□□□□ 0.58
CLDN2P57739 MIR3180-5-201ENST00000583743 153 ntBASIC18.65■□□□□ 0.58
CLDN2P57739 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN2P57739 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN2P57739 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN2P57739 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN2P57739 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN2P57739 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN2P57739 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN2P57739 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
CLDN2P57739 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN2P57739 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN2P57739 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLDN2P57739 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN2P57739 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN2P57739 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN2P57739 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN2P57739 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CLDN2P57739 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN2P57739 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN2P57739 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLDN2P57739 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN2P57739 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN2P57739 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN2P57739 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN2P57739 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN2P57739 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN2P57739 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN2P57739 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
CLDN2P57739 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN2P57739 AC092597.1-201ENST00000487352 616 ntBASIC18.63■□□□□ 0.57
CLDN2P57739 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN2P57739 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.63■□□□□ 0.57
CLDN2P57739 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.63■□□□□ 0.57
CLDN2P57739 AC116407.4-201ENST00000623319 1061 ntBASIC18.63■□□□□ 0.57
CLDN2P57739 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN2P57739 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN2P57739 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN2P57739 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLDN2P57739 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN2P57739 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN2P57739 RASA4DP-201ENST00000460726 1199 ntBASIC18.62■□□□□ 0.57
CLDN2P57739 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN2P57739 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN2P57739 AL136038.3-201ENST00000561909 1096 ntBASIC18.62■□□□□ 0.57
CLDN2P57739 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN2P57739 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN2P57739 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms