Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PMS2P54278 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.51■□□□□ 0.71
PMS2P54278 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.51■□□□□ 0.71
PMS2P54278 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.5■□□□□ 0.71
PMS2P54278 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PMS2P54278 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.5■□□□□ 0.71
PMS2P54278 AL390719.1-204ENST00000412397 1219 ntBASIC19.5■□□□□ 0.71
PMS2P54278 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PMS2P54278 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PMS2P54278 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PMS2P54278 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.5■□□□□ 0.71
PMS2P54278 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PMS2P54278 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PMS2P54278 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PMS2P54278 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.5■□□□□ 0.71
PMS2P54278 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PMS2P54278 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.49■□□□□ 0.71
PMS2P54278 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.49■□□□□ 0.71
PMS2P54278 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
PMS2P54278 LSM12P1-201ENST00000411836 588 ntBASIC19.49■□□□□ 0.71
PMS2P54278 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.49■□□□□ 0.71
PMS2P54278 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.49■□□□□ 0.71
PMS2P54278 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.49■□□□□ 0.71
PMS2P54278 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.49■□□□□ 0.71
PMS2P54278 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 HCG11-201ENST00000411553 5696 ntBASIC19.49■□□□□ 0.71
PMS2P54278 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PMS2P54278 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.49■□□□□ 0.71
PMS2P54278 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.49■□□□□ 0.71
PMS2P54278 FZD10-202ENST00000539839 3282 ntBASIC19.49■□□□□ 0.71
PMS2P54278 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PMS2P54278 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS2P54278 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS2P54278 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PMS2P54278 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.48■□□□□ 0.71
PMS2P54278 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.48■□□□□ 0.71
PMS2P54278 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.48■□□□□ 0.71
PMS2P54278 AC006058.3-201ENST00000606217 1069 ntBASIC19.48■□□□□ 0.71
PMS2P54278 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.48■□□□□ 0.71
PMS2P54278 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PMS2P54278 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS2P54278 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS2P54278 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PMS2P54278 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.48■□□□□ 0.71
PMS2P54278 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.48■□□□□ 0.71
PMS2P54278 AC073592.3-201ENST00000625118 1834 ntBASIC19.48■□□□□ 0.71
PMS2P54278 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS2P54278 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.48■□□□□ 0.71
PMS2P54278 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PMS2P54278 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.47■□□□□ 0.71
PMS2P54278 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms