Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GBX2P52951 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.84■□□□□ 0.29
GBX2P52951 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
GBX2P52951 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GBX2P52951 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GBX2P52951 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.83■□□□□ 0.29
GBX2P52951 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 NOC2LP2-201ENST00000407594 1944 ntBASIC16.83■□□□□ 0.28
GBX2P52951 TUBB8P6-201ENST00000436895 1288 ntBASIC16.83■□□□□ 0.28
GBX2P52951 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.83■□□□□ 0.28
GBX2P52951 AF201337.1-201ENST00000520239 748 ntBASIC16.83■□□□□ 0.28
GBX2P52951 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GBX2P52951 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
GBX2P52951 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
GBX2P52951 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
GBX2P52951 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.82■□□□□ 0.28
GBX2P52951 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GBX2P52951 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.82■□□□□ 0.28
GBX2P52951 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.82■□□□□ 0.28
GBX2P52951 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
GBX2P52951 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.82■□□□□ 0.28
GBX2P52951 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 KRT18P16-201ENST00000510337 1294 ntBASIC16.82■□□□□ 0.28
GBX2P52951 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.82■□□□□ 0.28
GBX2P52951 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GBX2P52951 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GBX2P52951 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.82■□□□□ 0.28
GBX2P52951 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.81■□□□□ 0.28
GBX2P52951 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GBX2P52951 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GBX2P52951 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GBX2P52951 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.81■□□□□ 0.28
GBX2P52951 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GBX2P52951 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.81■□□□□ 0.28
GBX2P52951 ABALON-201ENST00000629058 1903 ntBASIC16.81■□□□□ 0.28
GBX2P52951 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.81■□□□□ 0.28
GBX2P52951 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.81■□□□□ 0.28
GBX2P52951 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.81■□□□□ 0.28
GBX2P52951 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.81■□□□□ 0.28
GBX2P52951 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GBX2P52951 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
GBX2P52951 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GBX2P52951 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GBX2P52951 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.8■□□□□ 0.28
GBX2P52951 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GBX2P52951 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GBX2P52951 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GBX2P52951 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
GBX2P52951 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GBX2P52951 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GBX2P52951 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GBX2P52951 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GBX2P52951 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GBX2P52951 AC004911.1-201ENST00000416316 871 ntBASIC16.8■□□□□ 0.28
GBX2P52951 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.8■□□□□ 0.28
GBX2P52951 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.8■□□□□ 0.28
GBX2P52951 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GBX2P52951 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms