Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.56■□□□□ 0.4
RNF144AP50876 AC008040.2-201ENST00000461049 708 ntBASIC17.56■□□□□ 0.4
RNF144AP50876 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF144AP50876 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF144AP50876 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF144AP50876 AC131212.4-201ENST00000623606 975 ntBASIC17.56■□□□□ 0.4
RNF144AP50876 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF144AP50876 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
RNF144AP50876 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RNF144AP50876 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF144AP50876 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF144AP50876 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF144AP50876 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF144AP50876 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF144AP50876 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF144AP50876 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF144AP50876 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF144AP50876 RARRES2P10-201ENST00000564312 460 ntBASIC17.55■□□□□ 0.4
RNF144AP50876 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF144AP50876 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF144AP50876 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RNF144AP50876 NEFHP1-201ENST00000412845 2629 ntBASIC17.54■□□□□ 0.4
RNF144AP50876 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF144AP50876 RCC2P6-201ENST00000526625 1557 ntBASIC17.54■□□□□ 0.4
RNF144AP50876 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF144AP50876 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RNF144AP50876 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF144AP50876 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF144AP50876 Z99916.2-201ENST00000604037 246 ntBASIC17.54■□□□□ 0.4
RNF144AP50876 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RNF144AP50876 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF144AP50876 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RNF144AP50876 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF144AP50876 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF144AP50876 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 AC104581.1-202ENST00000635932 2618 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RNF144AP50876 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF144AP50876 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF144AP50876 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF144AP50876 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF144AP50876 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 KSR1P1-201ENST00000446298 240 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 AC011506.1-201ENST00000474329 610 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 AC091390.4-202ENST00000476426 537 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 CD177P1-201ENST00000606252 935 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 AC073195.1-201ENST00000607241 877 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 KRT8P11-201ENST00000409686 1436 ntBASIC17.53■□□□□ 0.4
RNF144AP50876 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF144AP50876 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF144AP50876 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF144AP50876 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms