Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CR1P49238 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CX3CR1P49238 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CX3CR1P49238 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.61■□□□□ 0.25
CX3CR1P49238 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 AC093525.10-201ENST00000625130 1569 ntBASIC16.61■□□□□ 0.25
CX3CR1P49238 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.61■□□□□ 0.25
CX3CR1P49238 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 AC133681.1-201ENST00000465482 601 ntBASIC16.61■□□□□ 0.25
CX3CR1P49238 CD99P1-205ENST00000527459 561 ntBASIC16.61■□□□□ 0.25
CX3CR1P49238 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CX3CR1P49238 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.61■□□□□ 0.25
CX3CR1P49238 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 AL031598.1-201ENST00000561511 1773 ntBASIC16.61■□□□□ 0.25
CX3CR1P49238 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.61■□□□□ 0.25
CX3CR1P49238 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CX3CR1P49238 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CR1P49238 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 KRT8P41-201ENST00000533985 1514 ntBASIC16.6■□□□□ 0.25
CX3CR1P49238 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CX3CR1P49238 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.6■□□□□ 0.25
CX3CR1P49238 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.6■□□□□ 0.25
CX3CR1P49238 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 Z98044.1-201ENST00000632503 1764 ntBASIC16.6■□□□□ 0.25
CX3CR1P49238 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.6■□□□□ 0.25
CX3CR1P49238 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.6■□□□□ 0.25
CX3CR1P49238 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CX3CR1P49238 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 AL512353.2-201ENST00000448759 1962 ntBASIC16.6■□□□□ 0.25
CX3CR1P49238 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 AC079598.2-202ENST00000546624 1451 ntBASIC16.6■□□□□ 0.25
CX3CR1P49238 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CR1P49238 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CX3CR1P49238 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CX3CR1P49238 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CR1P49238 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CR1P49238 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CX3CR1P49238 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.59■□□□□ 0.25
CX3CR1P49238 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CR1P49238 AC128676.1-201ENST00000454392 318 ntBASIC16.59■□□□□ 0.25
CX3CR1P49238 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CR1P49238 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CR1P49238 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.59■□□□□ 0.25
CX3CR1P49238 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CR1P49238 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CR1P49238 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.59■□□□□ 0.25
CX3CR1P49238 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.59■□□□□ 0.25
CX3CR1P49238 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.59■□□□□ 0.25
CX3CR1P49238 AC083906.6-201ENST00000641366 219 ntBASIC16.59■□□□□ 0.25
CX3CR1P49238 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.59■□□□□ 0.25
CX3CR1P49238 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CX3CR1P49238 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CR1P49238 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms