Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 MESTP1-201ENST00000404287 994 ntBASIC16.83■□□□□ 0.28
CSNK1A1P48729 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 AC116562.2-201ENST00000507042 360 ntBASIC16.83■□□□□ 0.28
CSNK1A1P48729 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 AP000692.2-201ENST00000608391 879 ntBASIC16.83■□□□□ 0.28
CSNK1A1P48729 DGCR10-201ENST00000609839 495 ntBASIC16.83■□□□□ 0.28
CSNK1A1P48729 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 CKBP1-201ENST00000565489 1086 ntBASIC16.82■□□□□ 0.28
CSNK1A1P48729 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 AC006333.2-201ENST00000607957 2099 ntBASIC16.82■□□□□ 0.28
CSNK1A1P48729 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1A1P48729 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1A1P48729 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 SLC25A1P4-201ENST00000567977 778 ntBASIC16.81■□□□□ 0.28
CSNK1A1P48729 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 MIR4785-201ENST00000585005 73 ntBASIC16.81■□□□□ 0.28
CSNK1A1P48729 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 REXO1L10P-201ENST00000615707 1290 ntBASIC16.81■□□□□ 0.28
CSNK1A1P48729 REXO1L12P-201ENST00000622156 912 ntBASIC16.81■□□□□ 0.28
CSNK1A1P48729 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1A1P48729 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1A1P48729 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.8■□□□□ 0.28
CSNK1A1P48729 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms