Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
KRT20P35900 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT20P35900 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
KRT20P35900 AL353807.1-201ENST00000427475 662 ntBASIC17.96■□□□□ 0.47
KRT20P35900 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KRT20P35900 GCSHP5-201ENST00000443090 522 ntBASIC17.96■□□□□ 0.47
KRT20P35900 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
KRT20P35900 AC098590.1-201ENST00000468126 897 ntBASIC17.96■□□□□ 0.47
KRT20P35900 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT20P35900 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT20P35900 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT20P35900 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.96■□□□□ 0.47
KRT20P35900 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.96■□□□□ 0.47
KRT20P35900 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KRT20P35900 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT20P35900 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
KRT20P35900 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.96■□□□□ 0.46
KRT20P35900 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.96■□□□□ 0.46
KRT20P35900 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
KRT20P35900 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KRT20P35900 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
KRT20P35900 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT20P35900 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KRT20P35900 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT20P35900 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT20P35900 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT20P35900 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT20P35900 AP002982.1-201ENST00000492365 877 ntBASIC17.95■□□□□ 0.46
KRT20P35900 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.95■□□□□ 0.46
KRT20P35900 C1QL1P1-201ENST00000568105 661 ntBASIC17.95■□□□□ 0.46
KRT20P35900 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.95■□□□□ 0.46
KRT20P35900 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT20P35900 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT20P35900 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT20P35900 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT20P35900 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
KRT20P35900 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT20P35900 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
KRT20P35900 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT20P35900 AC009113.1-201ENST00000570267 2443 ntBASIC17.94■□□□□ 0.46
KRT20P35900 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
KRT20P35900 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT20P35900 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
KRT20P35900 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT20P35900 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT20P35900 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.94■□□□□ 0.46
KRT20P35900 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT20P35900 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KRT20P35900 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
KRT20P35900 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 AL135905.2-201ENST00000584934 1404 ntBASIC17.94■□□□□ 0.46
KRT20P35900 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT20P35900 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT20P35900 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT20P35900 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KRT20P35900 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT20P35900 HTR7P1-201ENST00000538670 1336 ntBASIC17.94■□□□□ 0.46
KRT20P35900 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms