Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.39■□□□□ 0.53
EPHA3P29320 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.39■□□□□ 0.53
EPHA3P29320 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.39■□□□□ 0.53
EPHA3P29320 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EPHA3P29320 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
EPHA3P29320 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.39■□□□□ 0.53
EPHA3P29320 CROCCP5-201ENST00000436658 830 ntBASIC18.39■□□□□ 0.53
EPHA3P29320 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 AC026185.1-201ENST00000445748 174 ntBASIC18.39■□□□□ 0.53
EPHA3P29320 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.39■□□□□ 0.53
EPHA3P29320 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.39■□□□□ 0.53
EPHA3P29320 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.39■□□□□ 0.53
EPHA3P29320 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.39■□□□□ 0.53
EPHA3P29320 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.39■□□□□ 0.53
EPHA3P29320 MIR5787-201ENST00000611784 55 ntBASIC18.39■□□□□ 0.53
EPHA3P29320 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.39■□□□□ 0.53
EPHA3P29320 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
EPHA3P29320 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EPHA3P29320 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
EPHA3P29320 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPHA3P29320 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.38■□□□□ 0.53
EPHA3P29320 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.38■□□□□ 0.53
EPHA3P29320 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.38■□□□□ 0.53
EPHA3P29320 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
EPHA3P29320 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.38■□□□□ 0.53
EPHA3P29320 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.38■□□□□ 0.53
EPHA3P29320 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.38■□□□□ 0.53
EPHA3P29320 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
EPHA3P29320 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.38■□□□□ 0.53
EPHA3P29320 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPHA3P29320 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
EPHA3P29320 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.37■□□□□ 0.53
EPHA3P29320 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
EPHA3P29320 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
EPHA3P29320 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
EPHA3P29320 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.37■□□□□ 0.53
EPHA3P29320 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.37■□□□□ 0.53
EPHA3P29320 IKBKGP1-201ENST00000612193 1073 ntBASIC18.37■□□□□ 0.53
EPHA3P29320 AC120498.8-201ENST00000614275 531 ntBASIC18.37■□□□□ 0.53
EPHA3P29320 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.37■□□□□ 0.53
EPHA3P29320 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 AL121829.2-201ENST00000620908 328 ntBASIC18.37■□□□□ 0.53
EPHA3P29320 HLA-B-256ENST00000639848 1089 ntBASIC18.37■□□□□ 0.53
EPHA3P29320 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.37■□□□□ 0.53
EPHA3P29320 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
EPHA3P29320 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 AC020916.1-201ENST00000587762 1774 ntBASIC18.37■□□□□ 0.53
EPHA3P29320 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA3P29320 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
EPHA3P29320 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms