Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 GPT2-205ENST00000569193 3205 ntTSL 1 (best)12.66□□□□□ -0.385e-8■■■■□ 19.8
RPS3P23396 ILVBL-204ENST00000527093 1090 ntTSL 1 (best)18.23■□□□□ 0.516e-7■■■■□ 19.8
RPS3P23396 ILVBL-214ENST00000600984 709 ntTSL 316.52■□□□□ 0.246e-7■■■■□ 19.8
RPS3P23396 MCM3-204ENST00000476448 982 ntTSL 212.94□□□□□ -0.341e-6■■■■□ 19.8
RPS3P23396 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.1■□□□□ 0.813e-7■■■■□ 19.8
RPS3P23396 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.463e-7■■■■□ 19.8
RPS3P23396 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.35■□□□□ 0.053e-7■■■■□ 19.8
RPS3P23396 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.522e-27■■■■□ 19.8
RPS3P23396 FITM2-201ENST00000396825 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.51e-6■■■■□ 19.8
RPS3P23396 GPAA1-218ENST00000534072 1090 ntTSL 218.36■□□□□ 0.532e-10■■■■□ 19.8
RPS3P23396 GPAA1-212ENST00000529638 1570 ntTSL 517.86■□□□□ 0.452e-10■■■■□ 19.8
RPS3P23396 GPAA1-216ENST00000531593 543 ntTSL 315.74■□□□□ 0.112e-10■■■■□ 19.8
RPS3P23396 GPAA1-215ENST00000530796 936 ntTSL 311.77□□□□□ -0.532e-10■■■■□ 19.8
RPS3P23396 PDIA4-203ENST00000466592 632 ntTSL 214.6□□□□□ -0.074e-11■■■■□ 19.8
RPS3P23396 ATP5J2-PTCD1-202ENST00000437572 544 ntTSL 416.36■□□□□ 0.213e-9■■■■□ 19.8
RPS3P23396 ATP5J2-PTCD1-203ENST00000451138 331 ntTSL 415.74■□□□□ 0.113e-9■■■■□ 19.8
RPS3P23396 PTCD1-204ENST00000430982 571 ntTSL 414.8□□□□□ -0.043e-9■■■■□ 19.8
RPS3P23396 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.23e-9■■■■□ 19.8
RPS3P23396 ATP5J2-206ENST00000466753 774 ntTSL 212.91□□□□□ -0.343e-9■■■■□ 19.8
RPS3P23396 ATP5J2-204ENST00000414062 541 ntTSL 49.79□□□□□ -0.843e-9■■■■□ 19.8
RPS3P23396 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC8.8□□□□□ -13e-9■■■■□ 19.8
RPS3P23396 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.143e-9■■■■□ 19.8
RPS3P23396 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.86□□□□□ -1.313e-9■■■■□ 19.8
RPS3P23396 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.32□□□□□ -1.43e-9■■■■□ 19.8
RPS3P23396 ATP5J2-210ENST00000491560 658 ntTSL 25.03□□□□□ -1.63e-9■■■■□ 19.8
RPS3P23396 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.15□□□□□ -1.753e-9■■■■□ 19.8
RPS3P23396 AURKAIP1-206ENST00000496905 608 ntTSL 217.36■□□□□ 0.372e-6■■■■□ 19.8
RPS3P23396 TMBIM1-206ENST00000425694 569 ntTSL 212.11□□□□□ -0.474e-7■■■■□ 19.8
RPS3P23396 TMBIM1-223ENST00000495113 596 ntTSL 212.11□□□□□ -0.474e-7■■■■□ 19.8
RPS3P23396 TMBIM1-210ENST00000439306 631 ntTSL 512.04□□□□□ -0.484e-7■■■■□ 19.8
RPS3P23396 TMBIM1-220ENST00000466012 572 ntTSL 512.04□□□□□ -0.484e-7■■■■□ 19.8
RPS3P23396 TMBIM1-207ENST00000429501 677 ntTSL 512□□□□□ -0.494e-7■■■■□ 19.8
RPS3P23396 TMBIM1-204ENST00000418569 589 ntTSL 310.4□□□□□ -0.744e-7■■■■□ 19.8
RPS3P23396 PLK1-209ENST00000570220 910 ntTSL 315.45■□□□□ 0.069e-7■■■■□ 19.7
RPS3P23396 PLK1-204ENST00000564202 584 ntTSL 315.42■□□□□ 0.069e-7■■■■□ 19.7
RPS3P23396 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.221e-11■■■■□ 19.7
RPS3P23396 NDRG1-205ENST00000517745 391 ntTSL 313.68□□□□□ -0.222e-7■■■■□ 19.7
RPS3P23396 STAT3-209ENST00000498330 559 ntTSL 28.64□□□□□ -1.032e-7■■■■□ 19.7
RPS3P23396 STAT3-206ENST00000471989 826 ntTSL 28.41□□□□□ -1.062e-7■■■■□ 19.7
RPS3P23396 NOC2L-204ENST00000483767 1611 ntTSL 218.62■□□□□ 0.573e-10■■■■□ 19.7
RPS3P23396 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.64□□□□□ -1.351e-8■■■■□ 19.7
RPS3P23396 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.43■□□□□ 0.78e-9■■■■□ 19.7
RPS3P23396 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.558e-9■■■■□ 19.7
RPS3P23396 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.19■□□□□ 0.58e-9■■■■□ 19.7
RPS3P23396 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC10.08□□□□□ -0.88e-9■■■■□ 19.7
RPS3P23396 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.398e-9■■■■□ 19.7
RPS3P23396 UCP2-203ENST00000539330 608 ntTSL 210.64□□□□□ -0.711e-11■■■■□ 19.7
RPS3P23396 UCP2-206ENST00000542615 538 ntTSL 310.64□□□□□ -0.711e-11■■■■□ 19.7
RPS3P23396 UCP2-205ENST00000541027 536 ntTSL 410.64□□□□□ -0.711e-11■■■■□ 19.7
RPS3P23396 TMEM50A-202ENST00000468704 799 ntTSL 316.65■□□□□ 0.264e-7■■■■□ 19.7
RPS3P23396 HNRNPL-213ENST00000601664 447 ntTSL 1 (best)15.12■□□□□ 0.011e-13■■■■□ 19.7
RPS3P23396 C16orf58-205ENST00000565128 584 ntTSL 422.77■■□□□ 1.245e-8■■■■□ 19.7
RPS3P23396 C16orf58-207ENST00000567578 636 ntTSL 421.49■■□□□ 1.035e-8■■■■□ 19.7
RPS3P23396 C16orf58-203ENST00000541442 1056 ntTSL 221.49■■□□□ 1.031e-7■■■■□ 19.7
RPS3P23396 C16orf58-204ENST00000564807 555 ntTSL 412.61□□□□□ -0.395e-8■■■■□ 19.7
RPS3P23396 NCSTN-206ENST00000435149 824 ntTSL 37.7□□□□□ -1.181e-6■■■■□ 19.7
RPS3P23396 RPL27-203ENST00000587478 584 ntTSL 221.16■□□□□ 0.981e-6■■■■□ 19.7
RPS3P23396 TECR-214ENST00000598715 541 ntTSL 59.79□□□□□ -0.845e-8■■■■□ 19.7
RPS3P23396 CCT7-213ENST00000488856 612 ntTSL 28.11□□□□□ -1.116e-7■■■■□ 19.7
RPS3P23396 EIF5A-209ENST00000573714 602 ntTSL 320.22■□□□□ 0.835e-7■■■■□ 19.7
RPS3P23396 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.17■□□□□ 0.661e-9■■■■□ 19.7
RPS3P23396 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.798e-7■■■■□ 19.7
RPS3P23396 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.186e-8■■■■□ 19.7
RPS3P23396 NCAPD2-207ENST00000539084 4290 ntTSL 210.67□□□□□ -0.76e-8■■■■□ 19.7
RPS3P23396 NCAPD2-202ENST00000382457 2844 ntTSL 510.29□□□□□ -0.766e-8■■■■□ 19.7
RPS3P23396 NCAPD2-211ENST00000542472 444 ntTSL 32.31□□□□□ -2.046e-8■■■■□ 19.7
RPS3P23396 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.214e-8■■■■□ 19.7
RPS3P23396 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.33■■□□□ 1.814e-8■■■■□ 19.7
RPS3P23396 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.424e-8■■■■□ 19.7
RPS3P23396 CYBA-203ENST00000562209 624 ntTSL 518.56■□□□□ 0.561e-18■■■■□ 19.7
RPS3P23396 CYBA-209ENST00000568278 439 ntTSL 512.71□□□□□ -0.371e-18■■■■□ 19.7
RPS3P23396 BAG6-261ENST00000469182 653 ntTSL 39.8□□□□□ -0.841e-9■■■■□ 19.7
RPS3P23396 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.361e-7■■■■□ 19.7
RPS3P23396 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.112e-8■■■■□ 19.7
RPS3P23396 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.48□□□□□ -0.094e-9■■■■□ 19.7
RPS3P23396 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-9■■■■□ 19.7
RPS3P23396 SNRPC-203ENST00000374018 600 ntTSL 5 BASIC10.33□□□□□ -0.764e-9■■■■□ 19.7
RPS3P23396 SNRPC-204ENST00000474635 511 ntTSL 58.33□□□□□ -1.084e-9■■■■□ 19.7
RPS3P23396 SYVN1-210ENST00000528487 775 ntTSL 513.7□□□□□ -0.223e-7■■■■□ 19.7
RPS3P23396 SYVN1-208ENST00000527142 796 ntTSL 510.49□□□□□ -0.733e-7■■■■□ 19.7
RPS3P23396 SYVN1-214ENST00000532771 709 ntTSL 39.2□□□□□ -0.943e-7■■■■□ 19.7
RPS3P23396 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 519.08■□□□□ 0.649e-7■■■■□ 19.7
RPS3P23396 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 09e-7■■■■□ 19.7
RPS3P23396 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.249e-7■■■■□ 19.7
RPS3P23396 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.629e-7■■■■□ 19.7
RPS3P23396 HIST1H2BN-202ENST00000449538 715 ntTSL 1 (best)17.02■□□□□ 0.323e-12■■■■□ 19.7
RPS3P23396 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.97■□□□□ 0.313e-12■■■■□ 19.7
RPS3P23396 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.67□□□□□ -1.183e-12■■■■□ 19.7
RPS3P23396 AKR1A1-213ENST00000497973 667 ntTSL 211.87□□□□□ -0.515e-7■■■■□ 19.7
RPS3P23396 COPZ1-217ENST00000553009 567 ntTSL 313.6□□□□□ -0.232e-7■■■■□ 19.7
RPS3P23396 ILVBL-208ENST00000533747 788 ntTSL 218.23■□□□□ 0.512e-7■■■■□ 19.7
RPS3P23396 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.431e-6■■■■□ 19.7
RPS3P23396 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.63□□□□□ -0.071e-6■■■■□ 19.7
RPS3P23396 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.25□□□□□ -0.131e-6■■■■□ 19.7
RPS3P23396 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.461e-6■■■■□ 19.7
RPS3P23396 AL080251.1-201ENST00000494072 4369 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.731e-6■■■■□ 19.7
RPS3P23396 TECR-205ENST00000594807 569 ntTSL 411.63□□□□□ -0.559e-8■■■■□ 19.7
RPS3P23396 SLC13A5-207ENST00000572727 618 ntTSL 214.45□□□□□ -0.11e-11■■■■□ 19.7
RPS3P23396 PSMD14-204ENST00000478123 478 ntTSL 210.49□□□□□ -0.731e-7■■■■□ 19.7
RPS3P23396 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.11■□□□□ 0.656e-8■■■■□ 19.7
Retrieved 100 of 24,271 protein–RNA pairs in 223.6 ms