Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT4P19013 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT4P19013 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT4P19013 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
KRT4P19013 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT4P19013 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT4P19013 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT4P19013 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT4P19013 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT4P19013 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KRT4P19013 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT4P19013 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 DUSP5P2-201ENST00000426873 1033 ntBASIC18.96■□□□□ 0.63
KRT4P19013 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT4P19013 AL050303.2-201ENST00000619798 666 ntBASIC18.96■□□□□ 0.63
KRT4P19013 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
KRT4P19013 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT4P19013 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT4P19013 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.96■□□□□ 0.63
KRT4P19013 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT4P19013 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.96■□□□□ 0.63
KRT4P19013 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.95■□□□□ 0.62
KRT4P19013 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
KRT4P19013 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KRT4P19013 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.95■□□□□ 0.62
KRT4P19013 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT4P19013 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KRT4P19013 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT4P19013 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT4P19013 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT4P19013 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
KRT4P19013 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT4P19013 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.94■□□□□ 0.62
KRT4P19013 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KRT4P19013 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT4P19013 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT4P19013 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT4P19013 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT4P19013 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KRT4P19013 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT4P19013 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT4P19013 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
KRT4P19013 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
KRT4P19013 AL162741.1-201ENST00000565563 1558 ntBASIC18.93■□□□□ 0.62
KRT4P19013 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KRT4P19013 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT4P19013 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.93■□□□□ 0.62
KRT4P19013 MIPEPP3-201ENST00000412105 444 ntBASIC18.93■□□□□ 0.62
KRT4P19013 AC026271.2-201ENST00000428091 497 ntBASIC18.93■□□□□ 0.62
KRT4P19013 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
KRT4P19013 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT4P19013 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.93■□□□□ 0.62
KRT4P19013 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KRT4P19013 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT4P19013 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms