Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.48■■□□□ 1.03
TPM2P07951 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.48■■□□□ 1.03
TPM2P07951 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM2P07951 AL356309.3-201ENST00000624132 1934 ntBASIC21.47■■□□□ 1.03
TPM2P07951 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.47■■□□□ 1.03
TPM2P07951 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.47■■□□□ 1.03
TPM2P07951 GPX1P1-201ENST00000388829 606 ntBASIC21.47■■□□□ 1.03
TPM2P07951 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.47■■□□□ 1.03
TPM2P07951 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.47■■□□□ 1.03
TPM2P07951 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.47■■□□□ 1.03
TPM2P07951 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.47■■□□□ 1.03
TPM2P07951 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM2P07951 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM2P07951 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.47■■□□□ 1.03
TPM2P07951 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM2P07951 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM2P07951 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM2P07951 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
TPM2P07951 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.47■■□□□ 1.03
TPM2P07951 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM2P07951 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM2P07951 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.46■■□□□ 1.03
TPM2P07951 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TPM2P07951 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
TPM2P07951 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.46■■□□□ 1.03
TPM2P07951 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 AC022517.1-201ENST00000592429 346 ntBASIC21.46■■□□□ 1.03
TPM2P07951 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TPM2P07951 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM2P07951 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.46■■□□□ 1.03
TPM2P07951 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
TPM2P07951 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.45■■□□□ 1.03
TPM2P07951 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
TPM2P07951 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
TPM2P07951 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.45■■□□□ 1.02
TPM2P07951 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 AC004911.1-201ENST00000416316 871 ntBASIC21.45■■□□□ 1.02
TPM2P07951 AF201337.1-201ENST00000520239 748 ntBASIC21.45■■□□□ 1.02
TPM2P07951 AC105036.2-201ENST00000569468 176 ntBASIC21.45■■□□□ 1.02
TPM2P07951 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.45■■□□□ 1.02
TPM2P07951 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.45■■□□□ 1.02
TPM2P07951 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TPM2P07951 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
TPM2P07951 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM2P07951 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.44■■□□□ 1.02
TPM2P07951 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TPM2P07951 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.44■■□□□ 1.02
TPM2P07951 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
TPM2P07951 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TPM2P07951 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.44■■□□□ 1.02
TPM2P07951 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.44■■□□□ 1.02
TPM2P07951 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.44■■□□□ 1.02
TPM2P07951 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.44■■□□□ 1.02
TPM2P07951 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TPM2P07951 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TPM2P07951 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
TPM2P07951 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.44■■□□□ 1.02
TPM2P07951 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM2P07951 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.44■■□□□ 1.02
TPM2P07951 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM2P07951 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM2P07951 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.43■■□□□ 1.02
TPM2P07951 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM2P07951 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TPM2P07951 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TPM2P07951 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TPM2P07951 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.43■■□□□ 1.02
TPM2P07951 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM2P07951 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM2P07951 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TPM2P07951 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms