Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RB1P06400 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RB1P06400 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RB1P06400 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RB1P06400 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.98■□□□□ 0.79
RB1P06400 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
RB1P06400 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.98■□□□□ 0.79
RB1P06400 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.98■□□□□ 0.79
RB1P06400 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.98■□□□□ 0.79
RB1P06400 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RB1P06400 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.98■□□□□ 0.79
RB1P06400 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RB1P06400 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RB1P06400 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 AC233702.3-201ENST00000578656 1387 ntBASIC19.97■□□□□ 0.79
RB1P06400 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.97■□□□□ 0.79
RB1P06400 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RB1P06400 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 AC079776.4-201ENST00000511039 504 ntBASIC19.97■□□□□ 0.79
RB1P06400 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.97■□□□□ 0.79
RB1P06400 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RB1P06400 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.97■□□□□ 0.79
RB1P06400 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.97■□□□□ 0.79
RB1P06400 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.97■□□□□ 0.79
RB1P06400 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RB1P06400 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RB1P06400 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RB1P06400 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.96■□□□□ 0.79
RB1P06400 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RB1P06400 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 KRT16P4-201ENST00000453883 522 ntBASIC19.96■□□□□ 0.79
RB1P06400 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.96■□□□□ 0.79
RB1P06400 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.96■□□□□ 0.79
RB1P06400 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.96■□□□□ 0.79
RB1P06400 BX640515.1-201ENST00000617215 977 ntBASIC19.96■□□□□ 0.79
RB1P06400 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RB1P06400 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RB1P06400 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.95■□□□□ 0.78
RB1P06400 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.95■□□□□ 0.78
RB1P06400 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 AP000593.1-201ENST00000393668 712 ntBASIC19.95■□□□□ 0.78
RB1P06400 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.95■□□□□ 0.78
RB1P06400 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.95■□□□□ 0.78
RB1P06400 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 MIR3180-4-201ENST00000582223 153 ntBASIC19.95■□□□□ 0.78
RB1P06400 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.95■□□□□ 0.78
RB1P06400 AC138894.3-201ENST00000603787 634 ntBASIC19.95■□□□□ 0.78
RB1P06400 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.95■□□□□ 0.78
RB1P06400 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 AC117500.6-201ENST00000624871 588 ntBASIC19.95■□□□□ 0.78
RB1P06400 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RB1P06400 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.95■□□□□ 0.78
RB1P06400 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RB1P06400 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.95■□□□□ 0.78
RB1P06400 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RB1P06400 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.94■□□□□ 0.78
RB1P06400 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RB1P06400 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.94■□□□□ 0.78
RB1P06400 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.94■□□□□ 0.78
RB1P06400 MRPL3P1-201ENST00000400109 1033 ntBASIC19.94■□□□□ 0.78
RB1P06400 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.94■□□□□ 0.78
RB1P06400 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.94■□□□□ 0.78
RB1P06400 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.94■□□□□ 0.78
RB1P06400 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.94■□□□□ 0.78
RB1P06400 AC099336.1-202ENST00000602961 463 ntBASIC19.94■□□□□ 0.78
RB1P06400 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms