Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC006538.3-201ENST00000612495 578 ntBASIC18.8■□□□□ 0.6
CAPNS1P04632 AL445675.2-201ENST00000620291 557 ntBASIC18.8■□□□□ 0.6
CAPNS1P04632 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CAPNS1P04632 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPNS1P04632 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPNS1P04632 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPNS1P04632 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPNS1P04632 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPNS1P04632 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPNS1P04632 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPNS1P04632 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CAPNS1P04632 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CAPNS1P04632 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPNS1P04632 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CAPNS1P04632 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPNS1P04632 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPNS1P04632 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPNS1P04632 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CAPNS1P04632 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPNS1P04632 GPALPP1-207ENST00000611650 899 ntBASIC18.79■□□□□ 0.6
CAPNS1P04632 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPNS1P04632 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPNS1P04632 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 AC007613.1-201ENST00000572811 2597 ntBASIC18.79■□□□□ 0.6
CAPNS1P04632 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPNS1P04632 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 AL032819.2-201ENST00000624543 2162 ntBASIC18.78■□□□□ 0.6
CAPNS1P04632 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.78■□□□□ 0.6
CAPNS1P04632 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 AC092647.4-201ENST00000457211 535 ntBASIC18.78■□□□□ 0.6
CAPNS1P04632 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.78■□□□□ 0.6
CAPNS1P04632 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.78■□□□□ 0.6
CAPNS1P04632 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.78■□□□□ 0.6
CAPNS1P04632 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPNS1P04632 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CAPNS1P04632 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CAPNS1P04632 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CAPNS1P04632 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPNS1P04632 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.77■□□□□ 0.6
CAPNS1P04632 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPNS1P04632 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CAPNS1P04632 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CAPNS1P04632 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CAPNS1P04632 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CAPNS1P04632 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CAPNS1P04632 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.77■□□□□ 0.6
CAPNS1P04632 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.77■□□□□ 0.6
CAPNS1P04632 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.77■□□□□ 0.6
CAPNS1P04632 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.77■□□□□ 0.6
CAPNS1P04632 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.77■□□□□ 0.6
CAPNS1P04632 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPNS1P04632 AC012313.10-201ENST00000623509 926 ntBASIC18.77■□□□□ 0.6
CAPNS1P04632 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPNS1P04632 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CAPNS1P04632 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CAPNS1P04632 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CAPNS1P04632 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
CAPNS1P04632 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.77■□□□□ 0.59
CAPNS1P04632 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms