Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.7■□□□□ 0.74
LMNAP02545 FDX1P1-201ENST00000449115 551 ntBASIC19.7■□□□□ 0.74
LMNAP02545 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.7■□□□□ 0.74
LMNAP02545 KRT18P16-201ENST00000510337 1294 ntBASIC19.7■□□□□ 0.74
LMNAP02545 AC023511.2-201ENST00000618803 211 ntBASIC19.7■□□□□ 0.74
LMNAP02545 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.7■□□□□ 0.74
LMNAP02545 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNAP02545 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.7■□□□□ 0.74
LMNAP02545 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMNAP02545 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNAP02545 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNAP02545 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNAP02545 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMNAP02545 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMNAP02545 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNAP02545 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNAP02545 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNAP02545 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNAP02545 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNAP02545 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNAP02545 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNAP02545 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNAP02545 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNAP02545 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LMNAP02545 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNAP02545 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNAP02545 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LMNAP02545 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
LMNAP02545 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.68■□□□□ 0.74
LMNAP02545 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.68■□□□□ 0.74
LMNAP02545 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.68■□□□□ 0.74
LMNAP02545 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LMNAP02545 AL359075.1-203ENST00000462729 1002 ntBASIC19.68■□□□□ 0.74
LMNAP02545 C1QL1P1-201ENST00000568105 661 ntBASIC19.68■□□□□ 0.74
LMNAP02545 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 AC010653.2-201ENST00000623505 997 ntBASIC19.68■□□□□ 0.74
LMNAP02545 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.68■□□□□ 0.74
LMNAP02545 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
LMNAP02545 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.68■□□□□ 0.74
LMNAP02545 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMNAP02545 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
LMNAP02545 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.67■□□□□ 0.74
LMNAP02545 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.67■□□□□ 0.74
LMNAP02545 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
LMNAP02545 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
LMNAP02545 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.67■□□□□ 0.74
LMNAP02545 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.67■□□□□ 0.74
LMNAP02545 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.67■□□□□ 0.74
LMNAP02545 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LMNAP02545 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.67■□□□□ 0.74
LMNAP02545 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.67■□□□□ 0.74
LMNAP02545 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMNAP02545 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LMNAP02545 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LMNAP02545 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMNAP02545 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMNAP02545 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMNAP02545 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
LMNAP02545 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMNAP02545 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.66■□□□□ 0.74
LMNAP02545 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.66■□□□□ 0.74
LMNAP02545 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms