Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CDRT1O95170 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CDRT1O95170 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.85■□□□□ 0.29
CDRT1O95170 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDRT1O95170 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.85■□□□□ 0.29
CDRT1O95170 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.85■□□□□ 0.29
CDRT1O95170 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.85■□□□□ 0.29
CDRT1O95170 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 BID-214ENST00000617586 542 ntTSL 5 BASIC16.85■□□□□ 0.29
CDRT1O95170 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.85■□□□□ 0.29
CDRT1O95170 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.85■□□□□ 0.29
CDRT1O95170 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDRT1O95170 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.85■□□□□ 0.29
CDRT1O95170 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDRT1O95170 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.85■□□□□ 0.29
CDRT1O95170 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.85■□□□□ 0.29
CDRT1O95170 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDRT1O95170 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDRT1O95170 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.84■□□□□ 0.29
CDRT1O95170 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 AC007322.1-201ENST00000426983 750 ntBASIC16.84■□□□□ 0.29
CDRT1O95170 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.84■□□□□ 0.29
CDRT1O95170 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.84■□□□□ 0.29
CDRT1O95170 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.84■□□□□ 0.29
CDRT1O95170 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 C2orf69P4-201ENST00000565394 541 ntBASIC16.84■□□□□ 0.29
CDRT1O95170 AL589743.5-201ENST00000616611 1050 ntBASIC16.84■□□□□ 0.29
CDRT1O95170 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDRT1O95170 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 AC010980.2-201ENST00000587099 1412 ntBASIC16.84■□□□□ 0.29
CDRT1O95170 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.84■□□□□ 0.29
CDRT1O95170 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.84■□□□□ 0.29
CDRT1O95170 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.84■□□□□ 0.29
CDRT1O95170 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDRT1O95170 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDRT1O95170 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.83■□□□□ 0.29
CDRT1O95170 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
CDRT1O95170 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDRT1O95170 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDRT1O95170 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDRT1O95170 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.83■□□□□ 0.28
CDRT1O95170 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.83■□□□□ 0.28
CDRT1O95170 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDRT1O95170 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CDRT1O95170 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.83■□□□□ 0.28
CDRT1O95170 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.83■□□□□ 0.28
CDRT1O95170 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 AC023632.3-201ENST00000521633 145 ntBASIC16.83■□□□□ 0.28
CDRT1O95170 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.83■□□□□ 0.28
CDRT1O95170 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 AC116351.2-201ENST00000606540 1585 ntBASIC16.83■□□□□ 0.28
CDRT1O95170 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.83■□□□□ 0.28
CDRT1O95170 AC231657.2-201ENST00000624556 255 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms