Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
CDKL5O76039 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
CDKL5O76039 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.97■■□□□ 1.11
CDKL5O76039 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.97■■□□□ 1.11
CDKL5O76039 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDKL5O76039 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CDKL5O76039 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.97■■□□□ 1.11
CDKL5O76039 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.97■■□□□ 1.11
CDKL5O76039 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.97■■□□□ 1.11
CDKL5O76039 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.97■■□□□ 1.11
CDKL5O76039 REXO1L10P-201ENST00000615707 1290 ntBASIC21.97■■□□□ 1.11
CDKL5O76039 REXO1L12P-201ENST00000622156 912 ntBASIC21.97■■□□□ 1.11
CDKL5O76039 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
CDKL5O76039 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.97■■□□□ 1.11
CDKL5O76039 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
CDKL5O76039 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.97■■□□□ 1.11
CDKL5O76039 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKL5O76039 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 HEIH-201ENST00000623091 1652 ntBASIC21.96■■□□□ 1.11
CDKL5O76039 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.96■■□□□ 1.11
CDKL5O76039 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.96■■□□□ 1.11
CDKL5O76039 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 SLC25A1P4-201ENST00000567977 778 ntBASIC21.96■■□□□ 1.11
CDKL5O76039 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.96■■□□□ 1.11
CDKL5O76039 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.96■■□□□ 1.11
CDKL5O76039 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.96■■□□□ 1.11
CDKL5O76039 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CDKL5O76039 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CDKL5O76039 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDKL5O76039 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
CDKL5O76039 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.95■■□□□ 1.11
CDKL5O76039 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDKL5O76039 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CDKL5O76039 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CDKL5O76039 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 MFAP1P1-201ENST00000442257 1255 ntBASIC21.95■■□□□ 1.1
CDKL5O76039 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.95■■□□□ 1.1
CDKL5O76039 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.95■■□□□ 1.1
CDKL5O76039 MIR4785-201ENST00000585005 73 ntBASIC21.95■■□□□ 1.1
CDKL5O76039 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.95■■□□□ 1.1
CDKL5O76039 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.95■■□□□ 1.1
CDKL5O76039 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CDKL5O76039 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.95■■□□□ 1.1
CDKL5O76039 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 KRT8P32-201ENST00000512863 1461 ntBASIC21.95■■□□□ 1.1
CDKL5O76039 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.95■■□□□ 1.1
CDKL5O76039 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDKL5O76039 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.94■■□□□ 1.1
CDKL5O76039 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDKL5O76039 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.94■■□□□ 1.1
CDKL5O76039 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDKL5O76039 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDKL5O76039 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.94■■□□□ 1.1
CDKL5O76039 AC097488.1-201ENST00000507834 756 ntBASIC21.94■■□□□ 1.1
CDKL5O76039 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.94■■□□□ 1.1
CDKL5O76039 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
CDKL5O76039 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDKL5O76039 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.94■■□□□ 1.1
CDKL5O76039 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms