Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ANO7L1-203ENST00000602586 1720 ntBASIC17.15■□□□□ 0.34
CLPXO76031 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPXO76031 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CLPXO76031 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.14■□□□□ 0.34
CLPXO76031 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.14■□□□□ 0.33
CLPXO76031 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 AC011270.2-201ENST00000624293 2550 ntBASIC17.14■□□□□ 0.33
CLPXO76031 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.14■□□□□ 0.33
CLPXO76031 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.14■□□□□ 0.33
CLPXO76031 SLC7A5P2-201ENST00000553010 536 ntBASIC17.14■□□□□ 0.33
CLPXO76031 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 UBE2DNL-204ENST00000602536 740 ntBASIC17.14■□□□□ 0.33
CLPXO76031 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.14■□□□□ 0.33
CLPXO76031 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CLPXO76031 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLPXO76031 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.14■□□□□ 0.33
CLPXO76031 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CLPXO76031 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPXO76031 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 KRT16P6-202ENST00000425692 1426 ntBASIC17.13■□□□□ 0.33
CLPXO76031 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPXO76031 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CLPXO76031 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.13■□□□□ 0.33
CLPXO76031 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 AL645608.8-201ENST00000606034 2086 ntBASIC17.13■□□□□ 0.33
CLPXO76031 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPXO76031 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLPXO76031 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 KRT18P11-201ENST00000435214 1283 ntBASIC17.13■□□□□ 0.33
CLPXO76031 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPXO76031 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.13■□□□□ 0.33
CLPXO76031 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.13■□□□□ 0.33
CLPXO76031 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPXO76031 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPXO76031 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPXO76031 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.12■□□□□ 0.33
CLPXO76031 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.12■□□□□ 0.33
CLPXO76031 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 IRX1P1-201ENST00000438849 1838 ntBASIC17.12■□□□□ 0.33
CLPXO76031 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLPXO76031 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLPXO76031 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.12■□□□□ 0.33
CLPXO76031 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPXO76031 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPXO76031 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPXO76031 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPXO76031 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms