Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NDUFS3O75489 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.85■□□□□ 0.61
NDUFS3O75489 AC011506.1-201ENST00000474329 610 ntBASIC18.85■□□□□ 0.61
NDUFS3O75489 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.85■□□□□ 0.61
NDUFS3O75489 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.85■□□□□ 0.61
NDUFS3O75489 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.85■□□□□ 0.61
NDUFS3O75489 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.85■□□□□ 0.61
NDUFS3O75489 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFS3O75489 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.84■□□□□ 0.61
NDUFS3O75489 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
NDUFS3O75489 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.84■□□□□ 0.61
NDUFS3O75489 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.84■□□□□ 0.61
NDUFS3O75489 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 AC012618.2-201ENST00000428058 849 ntBASIC18.84■□□□□ 0.61
NDUFS3O75489 B3GAT3P1-201ENST00000471720 806 ntBASIC18.84■□□□□ 0.61
NDUFS3O75489 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.84■□□□□ 0.61
NDUFS3O75489 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.84■□□□□ 0.61
NDUFS3O75489 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.84■□□□□ 0.61
NDUFS3O75489 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.84■□□□□ 0.61
NDUFS3O75489 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.84■□□□□ 0.61
NDUFS3O75489 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NDUFS3O75489 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NDUFS3O75489 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NDUFS3O75489 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.84■□□□□ 0.61
NDUFS3O75489 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFS3O75489 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.83■□□□□ 0.61
NDUFS3O75489 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
NDUFS3O75489 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDUFS3O75489 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDUFS3O75489 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDUFS3O75489 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.83■□□□□ 0.6
NDUFS3O75489 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.83■□□□□ 0.6
NDUFS3O75489 AC008040.2-201ENST00000461049 708 ntBASIC18.83■□□□□ 0.6
NDUFS3O75489 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.83■□□□□ 0.6
NDUFS3O75489 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.83■□□□□ 0.6
NDUFS3O75489 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.83■□□□□ 0.6
NDUFS3O75489 AC083906.6-201ENST00000641366 219 ntBASIC18.83■□□□□ 0.6
NDUFS3O75489 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NDUFS3O75489 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NDUFS3O75489 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.83■□□□□ 0.6
NDUFS3O75489 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NDUFS3O75489 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NDUFS3O75489 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFS3O75489 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.82■□□□□ 0.6
NDUFS3O75489 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
NDUFS3O75489 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.82■□□□□ 0.6
NDUFS3O75489 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.82■□□□□ 0.6
NDUFS3O75489 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.82■□□□□ 0.6
NDUFS3O75489 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NDUFS3O75489 AC233702.5-201ENST00000584107 538 ntBASIC18.82■□□□□ 0.6
NDUFS3O75489 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.82■□□□□ 0.6
NDUFS3O75489 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.82■□□□□ 0.6
NDUFS3O75489 AL049637.2-201ENST00000641778 930 ntBASIC18.82■□□□□ 0.6
NDUFS3O75489 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.82■□□□□ 0.6
NDUFS3O75489 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NDUFS3O75489 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.82■□□□□ 0.6
NDUFS3O75489 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.82■□□□□ 0.6
NDUFS3O75489 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NDUFS3O75489 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms