Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21■□□□□ 0.95
LGR5O75473 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21■□□□□ 0.95
LGR5O75473 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21■□□□□ 0.95
LGR5O75473 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21■□□□□ 0.95
LGR5O75473 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LGR5O75473 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.99■□□□□ 0.95
LGR5O75473 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LGR5O75473 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LGR5O75473 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
LGR5O75473 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.99■□□□□ 0.95
LGR5O75473 VENTXP5-201ENST00000523979 775 ntBASIC20.99■□□□□ 0.95
LGR5O75473 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 AL136038.3-201ENST00000561909 1096 ntBASIC20.99■□□□□ 0.95
LGR5O75473 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.99■□□□□ 0.95
LGR5O75473 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.99■□□□□ 0.95
LGR5O75473 FP475955.4-201ENST00000623131 1990 ntBASIC20.99■□□□□ 0.95
LGR5O75473 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LGR5O75473 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 RCC2P3-201ENST00000418112 1537 ntBASIC20.99■□□□□ 0.95
LGR5O75473 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGR5O75473 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
LGR5O75473 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LGR5O75473 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 HCG4P8-203ENST00000443049 980 ntBASIC20.98■□□□□ 0.95
LGR5O75473 AC069148.1-201ENST00000608741 768 ntBASIC20.98■□□□□ 0.95
LGR5O75473 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.98■□□□□ 0.95
LGR5O75473 KRT8P32-201ENST00000512863 1461 ntBASIC20.98■□□□□ 0.95
LGR5O75473 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.98■□□□□ 0.95
LGR5O75473 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.98■□□□□ 0.95
LGR5O75473 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.98■□□□□ 0.95
LGR5O75473 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LGR5O75473 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.97■□□□□ 0.95
LGR5O75473 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LGR5O75473 AFG3L1P-217ENST00000557444 2447 ntBASIC20.97■□□□□ 0.95
LGR5O75473 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.97■□□□□ 0.95
LGR5O75473 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LGR5O75473 RASA4DP-201ENST00000460726 1199 ntBASIC20.97■□□□□ 0.95
LGR5O75473 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.97■□□□□ 0.95
LGR5O75473 SEC1P-202ENST00000473944 940 ntBASIC20.97■□□□□ 0.95
LGR5O75473 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.97■□□□□ 0.95
LGR5O75473 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.97■□□□□ 0.95
LGR5O75473 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.97■□□□□ 0.95
LGR5O75473 AC024243.1-201ENST00000609234 778 ntBASIC20.97■□□□□ 0.95
LGR5O75473 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LGR5O75473 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LGR5O75473 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGR5O75473 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.96■□□□□ 0.95
LGR5O75473 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.96■□□□□ 0.95
LGR5O75473 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LGR5O75473 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.96■□□□□ 0.95
LGR5O75473 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGR5O75473 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms