Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.07■□□□□ 0.48
LCMT2O60294 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
LCMT2O60294 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.07■□□□□ 0.48
LCMT2O60294 NAPSB-206ENST00000562112 1266 ntBASIC18.07■□□□□ 0.48
LCMT2O60294 C2orf69P3-201ENST00000565542 1120 ntBASIC18.07■□□□□ 0.48
LCMT2O60294 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.07■□□□□ 0.48
LCMT2O60294 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.07■□□□□ 0.48
LCMT2O60294 AC073912.3-201ENST00000624414 853 ntBASIC18.07■□□□□ 0.48
LCMT2O60294 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
LCMT2O60294 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.06■□□□□ 0.48
LCMT2O60294 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LCMT2O60294 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.06■□□□□ 0.48
LCMT2O60294 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
LCMT2O60294 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 SLC25A1P2-201ENST00000430693 912 ntBASIC18.06■□□□□ 0.48
LCMT2O60294 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.06■□□□□ 0.48
LCMT2O60294 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.06■□□□□ 0.48
LCMT2O60294 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.06■□□□□ 0.48
LCMT2O60294 AL353719.1-201ENST00000566847 864 ntBASIC18.06■□□□□ 0.48
LCMT2O60294 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
LCMT2O60294 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LCMT2O60294 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.06■□□□□ 0.48
LCMT2O60294 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCMT2O60294 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.06■□□□□ 0.48
LCMT2O60294 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LCMT2O60294 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
LCMT2O60294 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LCMT2O60294 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LCMT2O60294 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.05■□□□□ 0.48
LCMT2O60294 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.05■□□□□ 0.48
LCMT2O60294 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.05■□□□□ 0.48
LCMT2O60294 EGLN1P1-201ENST00000531623 762 ntBASIC18.05■□□□□ 0.48
LCMT2O60294 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.05■□□□□ 0.48
LCMT2O60294 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.05■□□□□ 0.48
LCMT2O60294 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.05■□□□□ 0.48
LCMT2O60294 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.05■□□□□ 0.48
LCMT2O60294 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LCMT2O60294 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.05■□□□□ 0.48
LCMT2O60294 KRT8P32-201ENST00000512863 1461 ntBASIC18.05■□□□□ 0.48
LCMT2O60294 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LCMT2O60294 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
LCMT2O60294 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 AC092338.2-201ENST00000568827 1415 ntBASIC18.05■□□□□ 0.48
LCMT2O60294 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 TNXA-203ENST00000507684 2038 ntBASIC18.05■□□□□ 0.48
LCMT2O60294 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCMT2O60294 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.04■□□□□ 0.48
LCMT2O60294 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LCMT2O60294 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms