Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.93■□□□□ 0.46
UPK1AO00322 NIFKP9-201ENST00000419265 221 ntBASIC17.93■□□□□ 0.46
UPK1AO00322 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UPK1AO00322 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.93■□□□□ 0.46
UPK1AO00322 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.93■□□□□ 0.46
UPK1AO00322 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
UPK1AO00322 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.93■□□□□ 0.46
UPK1AO00322 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 AL445675.2-201ENST00000620291 557 ntBASIC17.93■□□□□ 0.46
UPK1AO00322 FAM197Y4-202ENST00000622692 608 ntBASIC17.93■□□□□ 0.46
UPK1AO00322 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UPK1AO00322 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.93■□□□□ 0.46
UPK1AO00322 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UPK1AO00322 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.92■□□□□ 0.46
UPK1AO00322 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1AO00322 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1AO00322 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1AO00322 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.92■□□□□ 0.46
UPK1AO00322 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UPK1AO00322 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.92■□□□□ 0.46
UPK1AO00322 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.92■□□□□ 0.46
UPK1AO00322 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.92■□□□□ 0.46
UPK1AO00322 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1AO00322 AL353708.3-201ENST00000610272 989 ntBASIC17.92■□□□□ 0.46
UPK1AO00322 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.92■□□□□ 0.46
UPK1AO00322 IRX1P1-201ENST00000438849 1838 ntBASIC17.92■□□□□ 0.46
UPK1AO00322 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.92■□□□□ 0.46
UPK1AO00322 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1AO00322 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1AO00322 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1AO00322 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1AO00322 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 ABHD17AP1-201ENST00000358206 933 ntBASIC17.91■□□□□ 0.46
UPK1AO00322 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 AC098590.1-201ENST00000468126 897 ntBASIC17.91■□□□□ 0.46
UPK1AO00322 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 AP002982.1-201ENST00000492365 877 ntBASIC17.91■□□□□ 0.46
UPK1AO00322 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.91■□□□□ 0.46
UPK1AO00322 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.91■□□□□ 0.46
UPK1AO00322 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1AO00322 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1AO00322 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 KRT8P41-201ENST00000533985 1514 ntBASIC17.91■□□□□ 0.46
UPK1AO00322 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1AO00322 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1AO00322 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1AO00322 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
UPK1AO00322 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms