Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 UNC93B4-201ENST00000505679 747 ntBASIC20.11■□□□□ 0.81
RCCD1A6NED2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RCCD1A6NED2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RCCD1A6NED2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RCCD1A6NED2 AC020763.4-201ENST00000623414 4170 ntBASIC20.09■□□□□ 0.81
RCCD1A6NED2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 AC068587.9-201ENST00000641814 219 ntBASIC20.09■□□□□ 0.81
RCCD1A6NED2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 AC135776.1-201ENST00000319817 2481 ntBASIC20.09■□□□□ 0.81
RCCD1A6NED2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.09■□□□□ 0.81
RCCD1A6NED2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCCD1A6NED2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RCCD1A6NED2 AL162741.1-201ENST00000565563 1558 ntBASIC20.08■□□□□ 0.81
RCCD1A6NED2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RCCD1A6NED2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RCCD1A6NED2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RCCD1A6NED2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RCCD1A6NED2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms