Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 AL390719.1-204ENST00000412397 1219 ntBASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 AP006587.1-201ENST00000534129 1502 ntBASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRDV1A0A1B0GX56 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 AC135776.1-201ENST00000319817 2481 ntBASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 OR10C1-204ENST00000622521 1039 ntBASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRDV1A0A1B0GX56 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 TSPY21P-201ENST00000433481 731 ntBASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TRDV1A0A1B0GX56 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 HEIH-201ENST00000623091 1652 ntBASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms