Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 AL451085.2-201ENST00000605085 799 ntBASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM238LA0A1B0GVL6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM238LA0A1B0GVL6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 AL031432.4-201ENST00000641729 2190 ntBASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM238LA0A1B0GVL6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms