Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RNF103-CHMP3A0A140T963 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
RNF103-CHMP3A0A140T963 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF103-CHMP3A0A140T963 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.21■□□□□ 0.5
RNF103-CHMP3A0A140T963 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC090192.1-201ENST00000517740 490 ntBASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC008687.6-201ENST00000596318 630 ntBASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 KRT8P8-201ENST00000434750 1448 ntBASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF103-CHMP3A0A140T963 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC141586.3-201ENST00000562166 1838 ntBASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC142086.2-201ENST00000569753 217 ntBASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF103-CHMP3A0A140T963 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms