Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 GCSHP5-201ENST00000443090 522 ntBASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 KSR1P1-201ENST00000446298 240 ntBASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 AC098590.1-201ENST00000468126 897 ntBASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 AL049812.1-201ENST00000432563 2267 ntBASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DRB4X5D2U9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 AL158047.1-201ENST00000445918 881 ntBASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 UBE2SP1-201ENST00000450587 669 ntBASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 AC131212.4-201ENST00000623606 975 ntBASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DRB4X5D2U9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 TSPY21P-201ENST00000433481 731 ntBASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 AC073195.1-201ENST00000607241 877 ntBASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms