Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 AC004448.1-201ENST00000458332 883 ntBASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
LINC01558Q9Y6Z2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 AP002365.1-201ENST00000603448 772 ntBASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 AC011551.1-201ENST00000614101 683 ntBASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 LINC02199-201ENST00000506655 2702 ntBASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 BX005040.4-201ENST00000637145 1518 ntBASIC9.82□□□□□ -0.84
LINC01558Q9Y6Z2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms