Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 KRT18P14-201ENST00000534205 1250 ntBASIC17.9■□□□□ 0.46
AP4S1Q9Y587 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
AP4S1Q9Y587 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
AP4S1Q9Y587 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 CYP2T3P-201ENST00000601990 817 ntBASIC17.89■□□□□ 0.45
AP4S1Q9Y587 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP4S1Q9Y587 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 AC134043.2-201ENST00000624206 2238 ntBASIC17.88■□□□□ 0.45
AP4S1Q9Y587 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 GNAS-203ENST00000306120 1878 ntBASIC17.88■□□□□ 0.45
AP4S1Q9Y587 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.88■□□□□ 0.45
AP4S1Q9Y587 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP4S1Q9Y587 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms