Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 AL162741.1-201ENST00000565563 1558 ntBASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D4Q9Y2X8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 AF201337.1-201ENST00000520239 748 ntBASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 AC105036.2-201ENST00000569468 176 ntBASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 LTB4R2-202ENST00000528054 3092 ntBASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 AC126763.1-201ENST00000552015 2118 ntBASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D4Q9Y2X8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 TSPY21P-201ENST00000433481 731 ntBASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms