Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 TSPY17P-201ENST00000450329 467 ntBASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 TNXA-203ENST00000507684 2038 ntBASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 AC092338.2-201ENST00000568827 1415 ntBASIC21.63■■□□□ 1.05
PCDHA4Q9UN74 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 CCR12P-201ENST00000446203 998 ntBASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 AC073912.3-201ENST00000624414 853 ntBASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 AC116562.4-202ENST00000641738 218 ntBASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA4Q9UN74 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 INGX-201ENST00000359239 846 ntBASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 AC068587.9-201ENST00000641814 219 ntBASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA4Q9UN74 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 RCC2P3-201ENST00000418112 1537 ntBASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 HEIH-201ENST00000623091 1652 ntBASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 AC007663.1-201ENST00000438948 1240 ntBASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 AP003041.3-201ENST00000527151 707 ntBASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 MIR4674-201ENST00000582457 87 ntBASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 CROCCP3-202ENST00000420820 1947 ntBASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 GPAT2P1-201ENST00000444924 1672 ntBASIC21.6■■□□□ 1.05
PCDHA4Q9UN74 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 AL023284.2-201ENST00000405850 579 ntBASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms