Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 SDHAP1-207ENST00000440850 2000 ntBASIC19.56■□□□□ 0.72
HPS4Q9NQG7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 VENTXP5-201ENST00000523979 775 ntBASIC19.56■□□□□ 0.72
HPS4Q9NQG7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 ZNF444P1-201ENST00000559497 298 ntBASIC19.56■□□□□ 0.72
HPS4Q9NQG7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS4Q9NQG7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 AC112907.3-201ENST00000577781 2400 ntBASIC19.55■□□□□ 0.72
HPS4Q9NQG7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS4Q9NQG7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 KRT18P48-201ENST00000434763 852 ntBASIC19.54■□□□□ 0.72
HPS4Q9NQG7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.54■□□□□ 0.72
HPS4Q9NQG7 KRT126P-201ENST00000549467 1181 ntBASIC19.54■□□□□ 0.72
HPS4Q9NQG7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms