Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 RCC2P6-201ENST00000526625 1557 ntBASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 AC073592.3-201ENST00000625118 1834 ntBASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 HEIH-201ENST00000623091 1652 ntBASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 POU5F1P3-201ENST00000428824 1078 ntBASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 AL499627.1-201ENST00000569373 2188 ntBASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 AC026366.1-201ENST00000488803 879 ntBASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 RNA5SP413-201ENST00000516373 109 ntBASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBB1Q9H4B7 MTMR9LP-203ENST00000426597 1545 ntBASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 KRT17P3-201ENST00000420566 1262 ntBASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 AL023875.1-201ENST00000640777 796 ntBASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TUBB1Q9H4B7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB1Q9H4B7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB1Q9H4B7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB1Q9H4B7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBB1Q9H4B7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms