Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 PKD1P6-201ENST00000343738 4769 ntBASIC20.96■□□□□ 0.95
RNF39Q9H2S5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 CASKP1-201ENST00000412870 582 ntBASIC20.96■□□□□ 0.95
RNF39Q9H2S5 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 FAM87A-204ENST00000613235 858 ntBASIC20.96■□□□□ 0.95
RNF39Q9H2S5 AC084781.1-201ENST00000613737 656 ntBASIC20.96■□□□□ 0.95
RNF39Q9H2S5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF39Q9H2S5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF39Q9H2S5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.95■□□□□ 0.94
RNF39Q9H2S5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 AL109924.4-201ENST00000623089 670 ntBASIC20.95■□□□□ 0.94
RNF39Q9H2S5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF39Q9H2S5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.94■□□□□ 0.94
RNF39Q9H2S5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.94■□□□□ 0.94
RNF39Q9H2S5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF39Q9H2S5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 CCL11-201ENST00000305869 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 CCNB2P1-201ENST00000399411 1150 ntBASIC20.93■□□□□ 0.94
RNF39Q9H2S5 AC104076.2-201ENST00000448912 469 ntBASIC20.93■□□□□ 0.94
RNF39Q9H2S5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF39Q9H2S5 UBE2V1P12-201ENST00000503954 474 ntBASIC20.93■□□□□ 0.94
RNF39Q9H2S5 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms