RNA–Protein interactions for RNA: ENST00000305869.3

CCL11-201, Transcript of C-C motif chemokine ligand 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL11, Length 1,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL11-201ENST00000305869 AEBP2Q6ZN18 517 aaPredicted RBP33.21■■■□□ 2.91
CCL11-201ENST00000305869 CHIC1Q5VXU3 224 aa31.99■■■□□ 2.71
CCL11-201ENST00000305869 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
CCL11-201ENST00000305869 PHF23Q9BUL5 403 aaPredicted RBP28.05■■■□□ 2.08
CCL11-201ENST00000305869 FOXD1Q16676 465 aa26.3■■□□□ 1.8
CCL11-201ENST00000305869 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
CCL11-201ENST00000305869 PPP6R1Q9UPN7 881 aa24.91■■□□□ 1.58
CCL11-201ENST00000305869 ADRA2BP18089 450 aa24.83■■□□□ 1.57
CCL11-201ENST00000305869 PIAS4Q8N2W9 510 aaPredicted RBP24.65■■□□□ 1.54
CCL11-201ENST00000305869 MSH5O43196 834 aa24.48■■□□□ 1.51
CCL11-201ENST00000305869 POTEDQ86YR6 584 aa23.14■■□□□ 1.29
CCL11-201ENST00000305869 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
CCL11-201ENST00000305869 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
CCL11-201ENST00000305869 MAPK8IP2Q13387 824 aaPredicted RBP22.67■■□□□ 1.22
CCL11-201ENST00000305869 PPP4R3CPQ6ZMV5 832 aa22.61■■□□□ 1.21
CCL11-201ENST00000305869 DMRT2Q9Y5R5 561 aa22.52■■□□□ 1.2
CCL11-201ENST00000305869 CNKSR2Q8WXI2 1034 aa22.11■■□□□ 1.13
CCL11-201ENST00000305869 NCBP3Q53F19 620 aaKnown RBP21.89■■□□□ 1.09
CCL11-201ENST00000305869 HOXD11P31277 338 aaPredicted RBP21.87■■□□□ 1.09
CCL11-201ENST00000305869 RNF216Q9NWF9 866 aaPredicted RBP21.81■■□□□ 1.08
CCL11-201ENST00000305869 NPM3O75607 178 aaKnown RBP21.55■■□□□ 1.04
CCL11-201ENST00000305869 KCNA4P22459 653 aa21.49■■□□□ 1.03
CCL11-201ENST00000305869 DCAF8L1A6NGE4 600 aa21.46■■□□□ 1.03
CCL11-201ENST00000305869 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
CCL11-201ENST00000305869 RNF39Q9H2S5 420 aa20.93■□□□□ 0.94
CCL11-201ENST00000305869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.92
CCL11-201ENST00000305869 CACNB1Q02641 598 aaPredicted RBP20.7■□□□□ 0.9
CCL11-201ENST00000305869 C1QBPQ07021 282 aaKnown RBP20.67■□□□□ 0.9
CCL11-201ENST00000305869 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
CCL11-201ENST00000305869 SLC4A2P04920 1241 aa20.48■□□□□ 0.87
CCL11-201ENST00000305869 U3KPZ7 1027 aaPredicted RBP20.4■□□□□ 0.86
CCL11-201ENST00000305869 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
CCL11-201ENST00000305869 ABCC9O60706 1549 aa20.04■□□□□ 0.8
CCL11-201ENST00000305869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
CCL11-201ENST00000305869 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
CCL11-201ENST00000305869 SPINK5Q9NQ38 1064 aaPredicted RBP19.96■□□□□ 0.79
CCL11-201ENST00000305869 FOXD4L1Q9NU39 408 aa19.95■□□□□ 0.78
CCL11-201ENST00000305869 MYCNP04198 464 aaPredicted RBP19.93■□□□□ 0.78
CCL11-201ENST00000305869 APLP2Q06481 763 aa19.93■□□□□ 0.78
CCL11-201ENST00000305869 SAMD1Q6SPF0 538 aaPredicted RBP19.92■□□□□ 0.78
CCL11-201ENST00000305869 CAPN15O75808 1086 aa19.89■□□□□ 0.77
CCL11-201ENST00000305869 ZBTB22O15209 634 aa19.76■□□□□ 0.75
CCL11-201ENST00000305869 DSG3P32926 999 aa19.73■□□□□ 0.75
CCL11-201ENST00000305869 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
CCL11-201ENST00000305869 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
CCL11-201ENST00000305869 ABCB7O75027 752 aa19.43■□□□□ 0.7
CCL11-201ENST00000305869 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
CCL11-201ENST00000305869 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
CCL11-201ENST00000305869 NACADO15069 1562 aa19.39■□□□□ 0.69
CCL11-201ENST00000305869 ATXN8OSP0DMR3 200 aa19.36■□□□□ 0.69
CCL11-201ENST00000305869 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
CCL11-201ENST00000305869 POLA2Q14181 598 aa19.27■□□□□ 0.68
CCL11-201ENST00000305869 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
CCL11-201ENST00000305869 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
CCL11-201ENST00000305869 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
CCL11-201ENST00000305869 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
CCL11-201ENST00000305869 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
CCL11-201ENST00000305869 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
CCL11-201ENST00000305869 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
CCL11-201ENST00000305869 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
CCL11-201ENST00000305869 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
CCL11-201ENST00000305869 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
CCL11-201ENST00000305869 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCL11-201ENST00000305869 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
CCL11-201ENST00000305869 FBLN2P98095 1184 aa18.64■□□□□ 0.57
CCL11-201ENST00000305869 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
CCL11-201ENST00000305869 MKRN4PQ13434 485 aaPredicted RBP18.55■□□□□ 0.56
CCL11-201ENST00000305869 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
CCL11-201ENST00000305869 SPDYE2BA6NHP3 402 aa18.41■□□□□ 0.54
CCL11-201ENST00000305869 SPDYE6P0CI01 402 aa18.41■□□□□ 0.54
CCL11-201ENST00000305869 SPDYE2Q495Y8 402 aa18.41■□□□□ 0.54
CCL11-201ENST00000305869 REM2Q8IYK8 340 aaPredicted RBP18.29■□□□□ 0.52
CCL11-201ENST00000305869 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
CCL11-201ENST00000305869 POTEHQ6S545 545 aa18.22■□□□□ 0.51
CCL11-201ENST00000305869 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
CCL11-201ENST00000305869 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
CCL11-201ENST00000305869 SSUH2Q9Y2M2 353 aa18.21■□□□□ 0.51
CCL11-201ENST00000305869 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
CCL11-201ENST00000305869 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
CCL11-201ENST00000305869 PITPNM1O00562 1244 aa18.07■□□□□ 0.48
CCL11-201ENST00000305869 SPDYE1Q8NFV5 336 aaPredicted RBP17.97■□□□□ 0.47
CCL11-201ENST00000305869 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
CCL11-201ENST00000305869 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
CCL11-201ENST00000305869 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
CCL11-201ENST00000305869 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
CCL11-201ENST00000305869 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCL11-201ENST00000305869 PIP4P2Q8N4L2 257 aa17.87■□□□□ 0.45
CCL11-201ENST00000305869 CLEC11AQ9Y240 323 aa17.84■□□□□ 0.45
CCL11-201ENST00000305869 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
CCL11-201ENST00000305869 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
CCL11-201ENST00000305869 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
CCL11-201ENST00000305869 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
CCL11-201ENST00000305869 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
CCL11-201ENST00000305869 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
CCL11-201ENST00000305869 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
CCL11-201ENST00000305869 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
CCL11-201ENST00000305869 PRKAR2AP13861 404 aaKnown RBP17.6■□□□□ 0.41
CCL11-201ENST00000305869 PROM2Q8N271 834 aa17.59■□□□□ 0.41
CCL11-201ENST00000305869 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
CCL11-201ENST00000305869 WIZO95785 1651 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms