RNA–Protein interactions for RNA: ENST00000412870.1

CASKP1-201, Transcript of calcium/calmodulin dependent serine protein kinase pseudogene 1, humanhuman

BASIC

Gene CASKP1, Length 582 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKP1-201ENST00000412870 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
CASKP1-201ENST00000412870 CHIC1Q5VXU3 224 aa30.62■■■□□ 2.49
CASKP1-201ENST00000412870 SENP3Q9H4L4 574 aaPredicted RBP27.88■■■□□ 2.05
CASKP1-201ENST00000412870 PHF23Q9BUL5 403 aaPredicted RBP27.54■■■□□ 2
CASKP1-201ENST00000412870 FOXD1Q16676 465 aa26.17■■□□□ 1.78
CASKP1-201ENST00000412870 POTEDQ86YR6 584 aa24.83■■□□□ 1.57
CASKP1-201ENST00000412870 MSH5O43196 834 aa24.5■■□□□ 1.51
CASKP1-201ENST00000412870 PIAS4Q8N2W9 510 aaPredicted RBP24.3■■□□□ 1.48
CASKP1-201ENST00000412870 PLPPR3Q6T4P5 718 aa24.19■■□□□ 1.46
CASKP1-201ENST00000412870 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
CASKP1-201ENST00000412870 ADRA2BP18089 450 aa24.07■■□□□ 1.44
CASKP1-201ENST00000412870 MAPK8IP2Q13387 824 aaPredicted RBP22.27■■□□□ 1.16
CASKP1-201ENST00000412870 DMRT2Q9Y5R5 561 aa22.08■■□□□ 1.13
CASKP1-201ENST00000412870 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
CASKP1-201ENST00000412870 CACNB1Q02641 598 aaPredicted RBP21.37■■□□□ 1.01
CASKP1-201ENST00000412870 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
CASKP1-201ENST00000412870 PPP4R3CPQ6ZMV5 832 aa21.21■□□□□ 0.99
CASKP1-201ENST00000412870 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
CASKP1-201ENST00000412870 RNF39Q9H2S5 420 aa20.96■□□□□ 0.95
CASKP1-201ENST00000412870 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
CASKP1-201ENST00000412870 RNF216Q9NWF9 866 aaPredicted RBP20.77■□□□□ 0.92
CASKP1-201ENST00000412870 C1QBPQ07021 282 aaKnown RBP20.54■□□□□ 0.88
CASKP1-201ENST00000412870 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
CASKP1-201ENST00000412870 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
CASKP1-201ENST00000412870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
CASKP1-201ENST00000412870 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
CASKP1-201ENST00000412870 KCNA4P22459 653 aa19.94■□□□□ 0.78
CASKP1-201ENST00000412870 U3KPZ7 1027 aaPredicted RBP19.69■□□□□ 0.74
CASKP1-201ENST00000412870 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
CASKP1-201ENST00000412870 DSG3P32926 999 aa19.5■□□□□ 0.71
CASKP1-201ENST00000412870 CAPN15O75808 1086 aa19.48■□□□□ 0.71
CASKP1-201ENST00000412870 POTEHQ6S545 545 aa19.33■□□□□ 0.68
CASKP1-201ENST00000412870 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
CASKP1-201ENST00000412870 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
CASKP1-201ENST00000412870 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
CASKP1-201ENST00000412870 ABCB7O75027 752 aa19.07■□□□□ 0.64
CASKP1-201ENST00000412870 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
CASKP1-201ENST00000412870 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
CASKP1-201ENST00000412870 APLP2Q06481 763 aa18.84■□□□□ 0.61
CASKP1-201ENST00000412870 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
CASKP1-201ENST00000412870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
CASKP1-201ENST00000412870 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
CASKP1-201ENST00000412870 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
CASKP1-201ENST00000412870 POLA2Q14181 598 aa18.46■□□□□ 0.55
CASKP1-201ENST00000412870 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
CASKP1-201ENST00000412870 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
CASKP1-201ENST00000412870 ZBTB22O15209 634 aa18.41■□□□□ 0.54
CASKP1-201ENST00000412870 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
CASKP1-201ENST00000412870 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
CASKP1-201ENST00000412870 FOXD4L1Q9NU39 408 aa18.11■□□□□ 0.49
CASKP1-201ENST00000412870 AKT1S1Q96B36 256 aa18■□□□□ 0.47
CASKP1-201ENST00000412870 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
CASKP1-201ENST00000412870 REM2Q8IYK8 340 aaPredicted RBP17.9■□□□□ 0.46
CASKP1-201ENST00000412870 SP7Q8TDD2 431 aaPredicted RBP17.9■□□□□ 0.46
CASKP1-201ENST00000412870 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
CASKP1-201ENST00000412870 PIP4P2Q8N4L2 257 aa17.86■□□□□ 0.45
CASKP1-201ENST00000412870 PITPNM1O00562 1244 aa17.76■□□□□ 0.43
CASKP1-201ENST00000412870 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.41
CASKP1-201ENST00000412870 HAX1O00165 279 aa17.61■□□□□ 0.41
CASKP1-201ENST00000412870 EVX2Q03828 476 aa17.51■□□□□ 0.39
CASKP1-201ENST00000412870 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
CASKP1-201ENST00000412870 SPDYE2BA6NHP3 402 aa17.37■□□□□ 0.37
CASKP1-201ENST00000412870 SPDYE6P0CI01 402 aa17.37■□□□□ 0.37
CASKP1-201ENST00000412870 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
CASKP1-201ENST00000412870 MKRN4PQ13434 485 aaPredicted RBP17.32■□□□□ 0.36
CASKP1-201ENST00000412870 FBLN2P98095 1184 aa17.31■□□□□ 0.36
CASKP1-201ENST00000412870 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
CASKP1-201ENST00000412870 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
CASKP1-201ENST00000412870 SPDYE1Q8NFV5 336 aaPredicted RBP17.17■□□□□ 0.34
CASKP1-201ENST00000412870 SSUH2Q9Y2M2 353 aa17.15■□□□□ 0.34
CASKP1-201ENST00000412870 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
CASKP1-201ENST00000412870 C19orf67A6NJJ6 358 aa17.1■□□□□ 0.33
CASKP1-201ENST00000412870 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
CASKP1-201ENST00000412870 GABBR2O75899 941 aa16.98■□□□□ 0.31
CASKP1-201ENST00000412870 FKBP8Q14318 412 aa16.93■□□□□ 0.3
CASKP1-201ENST00000412870 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
CASKP1-201ENST00000412870 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
CASKP1-201ENST00000412870 LHX8Q68G74 356 aa16.78■□□□□ 0.28
CASKP1-201ENST00000412870 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
CASKP1-201ENST00000412870 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
CASKP1-201ENST00000412870 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
CASKP1-201ENST00000412870 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
CASKP1-201ENST00000412870 AMER1Q5JTC6 1135 aaPredicted RBP16.57■□□□□ 0.24
CASKP1-201ENST00000412870 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
CASKP1-201ENST00000412870 ZRANB1Q9UGI0 708 aa16.38■□□□□ 0.21
CASKP1-201ENST00000412870 ZNF579Q8NAF0 562 aaKnown RBP16.37■□□□□ 0.21
CASKP1-201ENST00000412870 DCBLD2Q96PD2 775 aa16.36■□□□□ 0.21
CASKP1-201ENST00000412870 CLCN6P51797 869 aa16.33■□□□□ 0.2
CASKP1-201ENST00000412870 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
CASKP1-201ENST00000412870 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
CASKP1-201ENST00000412870 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
CASKP1-201ENST00000412870 PHF12Q96QT6 1004 aa16.18■□□□□ 0.18
CASKP1-201ENST00000412870 POTEB2H3BUK9 544 aa16.16■□□□□ 0.18
CASKP1-201ENST00000412870 OTUD5Q96G74 571 aa16.13■□□□□ 0.17
CASKP1-201ENST00000412870 PROM2Q8N271 834 aa16.12■□□□□ 0.17
CASKP1-201ENST00000412870 PLSCR2Q9NRY7 297 aa16.11■□□□□ 0.17
CASKP1-201ENST00000412870 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
CASKP1-201ENST00000412870 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
CASKP1-201ENST00000412870 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
CASKP1-201ENST00000412870 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms