Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CYSTM1Q9H1C7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CYSTM1Q9H1C7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CYSTM1Q9H1C7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CYSTM1Q9H1C7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CYSTM1Q9H1C7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.01□□□□□ -0.65
CYSTM1Q9H1C7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.01□□□□□ -0.65
CYSTM1Q9H1C7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 AC092384.3-202ENST00000564646 2873 ntBASIC11□□□□□ -0.65
CYSTM1Q9H1C7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 AL603756.1-201ENST00000606511 2163 ntBASIC11□□□□□ -0.65
CYSTM1Q9H1C7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CYSTM1Q9H1C7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CYSTM1Q9H1C7 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 AL137784.3-201ENST00000623858 2288 ntBASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 AC022188.1-201ENST00000620960 1664 ntBASIC10.98□□□□□ -0.65
CYSTM1Q9H1C7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms