Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC135279.2-201ENST00000545001 620 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AP000915.1-201ENST00000580756 548 ntTSL 3 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC009005.1-202ENST00000588908 625 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 VN1R88P-201ENST00000596787 292 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AL031963.3-201ENST00000606441 850 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 PDCD10-208ENST00000473645 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC026356.1-201ENST00000622688 1357 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 ITM2A-201ENST00000373298 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AL356234.1-201ENST00000404534 1779 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 CGA-201ENST00000369582 729 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 XIST-201ENST00000416330 750 ntTSL 2 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 CRYZP1-201ENST00000428923 947 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC013467.1-201ENST00000430717 1041 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01105-202ENST00000431182 708 ntTSL 4 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 HLA-V-202ENST00000446817 847 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC104389.2-201ENST00000450768 887 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 MTND4LP2-201ENST00000502312 285 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 BNIP3P41-201ENST00000503774 571 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 KLF3P1-201ENST00000521506 1022 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 GLYCAM1-201ENST00000546596 285 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AL022344.2-201ENST00000568976 968 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC078880.5-201ENST00000617845 421 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC004009.2-201ENST00000623016 728 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC015871.5-202ENST00000623252 701 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AP003733.4-201ENST00000623785 1697 ntBASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC11.73□□□□□ -0.53
KRTAP3-3Q9BYR6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 NMRAL2P-201ENST00000306399 891 ntBASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
KRTAP3-3Q9BYR6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms